RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ZNF577Q9BSK1 485 aa22.58■■□□□ 1.21
CLN6-206ENST00000565471 FAM49AQ9H0Q0 323 aaPredicted RBP22.58■■□□□ 1.21
CLN6-206ENST00000565471 HBP1O60381 514 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 PPFIA3O75145 1194 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 UPP2O95045 317 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 AAK1Q2M2I8 961 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 ZNF746Q6NUN9 644 aaPredicted RBP22.57■■□□□ 1.2
CLN6-206ENST00000565471 CCDC60Q8IWA6 550 aaPredicted RBP22.57■■□□□ 1.2
CLN6-206ENST00000565471 RASGRP4Q8TDF6 673 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 ATP8B4Q8TF62 1192 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 TRAPPC12Q8WVT3 735 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 ZBTB10Q96DT7 871 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 ZNF302Q9NR11 478 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 VPS54Q9P1Q0 977 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 COG5Q9UP83 839 aa22.57■■□□□ 1.2
CLN6-206ENST00000565471 COL1A2P08123 1366 aa22.56■■□□□ 1.2
CLN6-206ENST00000565471 SMIM35A0A1B0GVV1 85 aa22.56■■□□□ 1.2
CLN6-206ENST00000565471 M0QZ92 97 aa22.56■■□□□ 1.2
CLN6-206ENST00000565471 MTHFD1LQ6UB35 978 aa22.56■■□□□ 1.2
CLN6-206ENST00000565471 SMAP1Q8IYB5 467 aaPredicted RBP22.56■■□□□ 1.2
CLN6-206ENST00000565471 NME8Q8N427 588 aa22.56■■□□□ 1.2
CLN6-206ENST00000565471 FBXO22Q8NEZ5 403 aa22.56■■□□□ 1.2
CLN6-206ENST00000565471 C17orf80Q9BSJ5 609 aa22.56■■□□□ 1.2
CLN6-206ENST00000565471 TRPV2Q9Y5S1 764 aa22.56■■□□□ 1.2
CLN6-206ENST00000565471 KDM3AQ9Y4C1 1321 aa22.56■■□□□ 1.2
CLN6-206ENST00000565471 KRT76Q01546 638 aa22.55■■□□□ 1.2
CLN6-206ENST00000565471 SSRP1Q08945 709 aaKnown RBP22.55■■□□□ 1.2
CLN6-206ENST00000565471 PRR16Q569H4 304 aa22.55■■□□□ 1.2
CLN6-206ENST00000565471 PDXDC2PQ6P474 469 aa22.55■■□□□ 1.2
CLN6-206ENST00000565471 FAM177A1Q8N128 213 aaPredicted RBP22.55■■□□□ 1.2
CLN6-206ENST00000565471 IL27Q8NEV9 243 aa22.55■■□□□ 1.2
CLN6-206ENST00000565471 LENG9Q96B70 501 aa22.55■■□□□ 1.2
CLN6-206ENST00000565471 UPF3BQ9BZI7 483 aaKnown RBP22.55■■□□□ 1.2
CLN6-206ENST00000565471 PPP4R2Q9NY27 417 aa22.55■■□□□ 1.2
CLN6-206ENST00000565471 TCEAL9Q9UHQ7 104 aa22.55■■□□□ 1.2
CLN6-206ENST00000565471 VCANP13611 3396 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 ENPP3O14638 875 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 CPLX1O14810 134 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 DEXIO95424 95 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 USP11P51784 963 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 NLRP5P59047 1200 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 ZNF484Q5JVG2 852 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 ERICH6BQ5W0A0 696 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 SWSAP1Q6NVH7 229 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 ADAMTS19Q8TE59 1207 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 CELF4Q9BZC1 486 aaKnown RBP22.54■■□□□ 1.2
CLN6-206ENST00000565471 C22orf23Q9BZE7 217 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 AGO3Q9H9G7 860 aaKnown RBP22.54■■□□□ 1.2
CLN6-206ENST00000565471 MAFBQ9Y5Q3 323 aaPredicted RBP22.54■■□□□ 1.2
CLN6-206ENST00000565471 IGSF9BQ9UPX0 1349 aa22.54■■□□□ 1.2
CLN6-206ENST00000565471 TTC28Q96AY4 2481 aa22.53■■□□□ 1.2
CLN6-206ENST00000565471 KLRC1P26715 233 aa22.53■■□□□ 1.2
CLN6-206ENST00000565471 TFF2Q03403 129 aa22.53■■□□□ 1.2
CLN6-206ENST00000565471 EPC2Q52LR7 807 aa22.53■■□□□ 1.2
CLN6-206ENST00000565471 CPLX2Q6PUV4 134 aaKnown RBP22.53■■□□□ 1.2
CLN6-206ENST00000565471 FAM43BQ6ZT52 329 aaPredicted RBP22.53■■□□□ 1.2
CLN6-206ENST00000565471 IL17RAQ96F46 866 aa22.53■■□□□ 1.2
CLN6-206ENST00000565471 FTHL17Q9BXU8 183 aa22.53■■□□□ 1.2
CLN6-206ENST00000565471 PDRG1Q9NUG6 133 aa22.53■■□□□ 1.2
CLN6-206ENST00000565471 PCDHA10Q9Y5I2 948 aa22.53■■□□□ 1.2
CLN6-206ENST00000565471 TTC3P53804 2025 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 RALGAPA2Q2PPJ7 1873 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 TNFRSF10AO00220 468 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 EDIL3O43854 480 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 PSAPP07602 524 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 BMP1P13497 986 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 ATP4AP20648 1035 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 CD52P31358 61 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 TMEM62Q0P6H9 643 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 TMEM192Q8IY95 271 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 BBXQ8WY36 941 aaPredicted RBP22.52■■□□□ 1.2
CLN6-206ENST00000565471 HLA-CQ95604 372 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 UIMC1Q96RL1 719 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 RC3H2Q9HBD1 1191 aaKnown RBP22.52■■□□□ 1.2
CLN6-206ENST00000565471 PCDHA4Q9UN74 947 aa22.52■■□□□ 1.2
CLN6-206ENST00000565471 ZBTB42B2RXF5 422 aa22.51■■□□□ 1.19
CLN6-206ENST00000565471 H3BNC9 293 aa22.51■■□□□ 1.19
CLN6-206ENST00000565471 DAGLBQ8NCG7 672 aa22.51■■□□□ 1.19
CLN6-206ENST00000565471 LINC01599Q8WXQ3 324 aa22.51■■□□□ 1.19
CLN6-206ENST00000565471 RIT2Q99578 217 aa22.51■■□□□ 1.19
CLN6-206ENST00000565471 NLRC5Q86WI3 1866 aa22.51■■□□□ 1.19
CLN6-206ENST00000565471 MYH9P35579 1960 aaKnown RBP22.5■■□□□ 1.19
CLN6-206ENST00000565471 REV3LO60673 3130 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 PAK2Q13177 524 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 PTPROQ16827 1216 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 GALNT17Q6IS24 598 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 CKAP2LQ8IYA6 745 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 KIAA0319LQ8IZA0 1049 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 FIBCD1Q8N539 461 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 MRPL38Q96DV4 380 aaKnown RBP22.5■■□□□ 1.19
CLN6-206ENST00000565471 UHRF1Q96T88 793 aaPredicted RBP22.5■■□□□ 1.19
CLN6-206ENST00000565471 LARP6Q9BRS8 491 aaKnown RBP22.5■■□□□ 1.19
CLN6-206ENST00000565471 PADI3Q9ULW8 664 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 CEP131Q9UPN4 1083 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 ADGRA3Q8IWK6 1321 aa22.5■■□□□ 1.19
CLN6-206ENST00000565471 LOXHD1Q8IVV2 1947 aa22.49■■□□□ 1.19
CLN6-206ENST00000565471 WDR64B1ANS9 1081 aa22.49■■□□□ 1.19
CLN6-206ENST00000565471 M0R2N6 131 aa22.49■■□□□ 1.19
CLN6-206ENST00000565471 MSH4O15457 936 aa22.49■■□□□ 1.19
CLN6-206ENST00000565471 C22orf31O95567 290 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms