RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SIRT2Q8IXJ6 389 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 FMR1NBQ8N0W7 255 aaPredicted RBP6.8□□□□□ -1.32
PTPN9-204ENST00000564970 THEMISQ8N1K5 641 aaPredicted RBP6.8□□□□□ -1.32
PTPN9-204ENST00000564970 TTC30BQ8N4P2 665 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ANGPTL6Q8NI99 470 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 RIN2Q8WYP3 895 aaPredicted RBP6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ARL8AQ96BM9 186 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ZNF333Q96JL9 665 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 NSMCE3Q96MG7 304 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 GPR101Q96P66 508 aaPredicted RBP6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ZIM3Q96PE6 472 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 TTC1Q99614 292 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 TUBB6Q9BUF5 446 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 FAM129AQ9BZQ8 928 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 NDEL1Q9GZM8 345 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ANKRD2Q9GZV1 360 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 C10orf88Q9H8K7 445 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 PLGRKTQ9HBL7 147 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ARMC1Q9NVT9 282 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 CHIC2Q9UKJ5 165 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 TRAF3IP3Q9Y228 551 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 USH1CQ9Y6N9 552 aa6.8□□□□□ -1.32
PTPN9-204ENST00000564970 ABCA6Q8N139 1617 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 CDC42BPBQ9Y5S2 1711 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 CLRN2A0PK11 232 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 DYTNA2CJ06 578 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 GOLGA8BA8MQT2 603 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 HAT1O14929 419 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 XPO1O14980 1071 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 PEX14O75381 377 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 FKBP9O95302 570 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 GNA14O95837 355 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 GNAI2P04899 355 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 S100A6P06703 90 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 LDHBP07195 334 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 MAN1A1P33908 653 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 PAFAH1B1P43034 410 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 HDGFP51858 240 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 RELAQ04206 551 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 STK4Q13043 487 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 NMIQ13287 307 aaPredicted RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 E2F2Q14209 437 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 NR1D2Q14995 579 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 RRS1Q15050 365 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 ANKDD1AQ495B1 522 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 WDR45BQ5MNZ6 344 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 TCERG1LQ5VWI1 586 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 HAUS3Q68CZ6 603 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 RWDD4Q6NW29 188 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 DHRS4L2Q6PKH6 230 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 PRR23CQ6ZRP0 262 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 NET1Q7Z628 596 aaPredicted RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 KRT77Q7Z794 578 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 MCF2L2Q86YR7 1114 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 NELFCDQ8IXH7 590 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 SPICE1Q8N0Z3 855 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 CLASRPQ8N2M8 674 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 ALLCQ8N6M5 410 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 TSPYL6Q8N831 410 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 TERB1Q8NA31 727 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 BBOF1Q8ND07 529 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 OR7G1Q8NGA0 311 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 LILRB1Q8NHL6 650 aaPredicted RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 FRS2Q8WU20 508 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 RASSF5Q8WWW0 418 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 TMA16Q96EY4 203 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 COX4I2Q96KJ9 171 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 ZFRQ96KR1 1074 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 BIRC8Q96P09 236 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 OLFM1Q99784 485 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 DDX47Q9H0S4 455 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 LRMDAQ9H2I8 198 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 CAAP1Q9H8G2 361 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 MRPL44Q9H9J2 332 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 RXFP1Q9HBX9 757 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 MOV10Q9HCE1 1003 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 PPANQ9NQ55 473 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 DIABLOQ9NR28 239 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 AIPL1Q9NZN9 384 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 ZNF212Q9UDV6 495 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 RASAL2Q9UJF2 1139 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 APOBEC2Q9Y235 224 aaKnown RBP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 SNX14Q9Y5W7 946 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 ABCC6O95255 1503 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.79□□□□□ -1.32
PTPN9-204ENST00000564970 DUOX2Q9NRD8 1548 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 KIAA0556O60303 1618 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 NEO1Q92859 1461 aa6.79□□□□□ -1.32
PTPN9-204ENST00000564970 SALL3Q9BXA9 1300 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 NEURL4Q96JN8 1562 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ATP10DQ9P241 1426 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 GRID2IPA4D2P6 1211 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 BOLA2-SMG1P6H3BVE0 249 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 IGF2BP3O00425 579 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 TRAFD1O14545 582 aaPredicted RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 AP1G1O43747 822 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 ZNF862O60290 1169 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 CNOT3O75175 753 aaKnown RBP6.78□□□□□ -1.32
PTPN9-204ENST00000564970 TOMM70O94826 608 aa6.78□□□□□ -1.32
PTPN9-204ENST00000564970 FBXO21O94952 628 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms