RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 IGKV6D-21A0A0A0MT36 114 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 MCM3APO60318 1980 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 TBCAO75347 108 aaKnown RBP14.28□□□□□ -0.12
CLK3-214ENST00000564096 LGR5O75473 907 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 OATP04181 439 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 RARBP10826 455 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 ELNP15502 786 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 STAT5BP51692 787 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 ZNF445P59923 1031 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 DHX8Q14562 1220 aaKnown RBP14.28□□□□□ -0.12
CLK3-214ENST00000564096 STX1AQ16623 288 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 UGCGQ16739 394 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 DGKDQ16760 1214 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 HSDL1Q3SXM5 330 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 XKR3Q5GH77 459 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 PRAMEF19Q5SWL8 479 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 PLPPR4Q7Z2D5 763 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 KCNK18Q7Z418 384 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 GRAMD1CQ8IYS0 662 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 SYT2Q8N9I0 419 aaPredicted RBP14.28□□□□□ -0.12
CLK3-214ENST00000564096 TRIML1Q8N9V2 468 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 AFG1LQ8WV93 481 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 GSDMAQ96QA5 445 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 TRIM9Q9C026 710 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 SMARCAD1Q9H4L7 1026 aa14.28□□□□□ -0.12
CLK3-214ENST00000564096 SEPT9Q9UHD8 586 aaPredicted RBP14.28□□□□□ -0.12
CLK3-214ENST00000564096 GNEQ9Y223 722 aaKnown RBP14.28□□□□□ -0.12
CLK3-214ENST00000564096 MAFBQ9Y5Q3 323 aaPredicted RBP14.28□□□□□ -0.12
CLK3-214ENST00000564096 GSTTP1A0A1W2PQM5 241 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 MSCO60682 206 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 DUSP11O75319 330 aaKnown RBP14.27□□□□□ -0.13
CLK3-214ENST00000564096 LGALS2P05162 132 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 MMP3P08254 477 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 CNGA1P29973 690 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 GRK4P32298 578 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 SLC12A3P55017 1021 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 CAP1Q01518 475 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 DPYDQ12882 1025 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 UTP14CQ5TAP6 766 aaKnown RBP14.27□□□□□ -0.13
CLK3-214ENST00000564096 CNNM4Q6P4Q7 775 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 PIGOQ8TEQ8 1089 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 C7orf25Q9BPX7 421 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 TIPINQ9BVW5 301 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 EXOC1Q9NV70 894 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 ERAP1Q9NZ08 941 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 WRAP73Q9P2S5 460 aaPredicted RBP14.27□□□□□ -0.13
CLK3-214ENST00000564096 DACH1Q9UI36 760 aa14.27□□□□□ -0.13
CLK3-214ENST00000564096 LOXHD1Q8IVV2 1947 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 FOXN1O15353 648 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 DYNC1LI2O43237 492 aaPredicted RBP14.26□□□□□ -0.13
CLK3-214ENST00000564096 ZEB2O60315 1214 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 PPFIA4O75335 1185 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 RPN1P04843 607 aaKnown RBP14.26□□□□□ -0.13
CLK3-214ENST00000564096 INHAP05111 366 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
CLK3-214ENST00000564096 RARRES1P49788 294 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 MDM2Q00987 491 aaPredicted RBP14.26□□□□□ -0.13
CLK3-214ENST00000564096 CACNB2Q08289 660 aaPredicted RBP14.26□□□□□ -0.13
CLK3-214ENST00000564096 CUL4BQ13620 913 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 XKR9Q5GH70 373 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 GJC2Q5T442 439 aaPredicted RBP14.26□□□□□ -0.13
CLK3-214ENST00000564096 MAP3K21Q5TCX8 1036 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 NT5DC1Q5TFE4 455 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 LRSAM1Q6UWE0 723 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 CCDC65Q8IXS2 484 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 LRRC15Q8TF66 581 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 BBXQ8WY36 941 aaPredicted RBP14.26□□□□□ -0.13
CLK3-214ENST00000564096 DDX12PQ92771 950 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 STAMQ92783 540 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 CEP170P1Q96L14 293 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 BLZF1Q9H2G9 400 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 BCAS3Q9H6U6 928 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 NRBP2Q9NSY0 501 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 ANO10Q9NW15 660 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 TUBE1Q9UJT0 475 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 TRPC6Q9Y210 931 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 PCDHA5Q9Y5H7 936 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 PTCH2Q9Y6C5 1203 aa14.26□□□□□ -0.13
CLK3-214ENST00000564096 PVALEFA0A1B0GWK0 134 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 A6NJR5 290 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 KPNA6O60684 536 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 CAVIN2O95810 425 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
CLK3-214ENST00000564096 CYP11B2P19099 503 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 PSMC6P62333 389 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 TYRO3Q06418 890 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 KCNB1Q14721 858 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 PADI6Q6TGC4 694 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 UNC13DQ70J99 1090 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 EXOC8Q8IYI6 725 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 TRPV1Q8NER1 839 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 ATP8B4Q8TF62 1192 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 MTRQ99707 1265 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 NAT10Q9H0A0 1025 aaKnown RBP14.25□□□□□ -0.13
CLK3-214ENST00000564096 TSPY26PQ9H489 355 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 ODF2LQ9ULJ1 636 aa14.25□□□□□ -0.13
CLK3-214ENST00000564096 SYNRGQ9UMZ2 1314 aa14.24□□□□□ -0.13
CLK3-214ENST00000564096 MYMKA6NI61 221 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms