RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ATG7O95352 703 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 ERVK-21P61565 698 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 MRPS5P82675 430 aaKnown RBP20.06■□□□□ 0.8
NME3-205ENST00000563854 FBXO47Q5MNV8 452 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 SWSAP1Q6NVH7 229 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 CPLX2Q6PUV4 134 aaKnown RBP20.06■□□□□ 0.8
NME3-205ENST00000563854 ABHD15Q6UXT9 468 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 FBXO22Q8NEZ5 403 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 TOP1MTQ969P6 601 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 ASB2Q96Q27 587 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 SAMM50Q9Y512 469 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 TRPV2Q9Y5S1 764 aa20.06■□□□□ 0.8
NME3-205ENST00000563854 DHX15O43143 795 aaKnown RBP20.05■□□□□ 0.8
NME3-205ENST00000563854 LPXNO60711 386 aa20.05■□□□□ 0.8
NME3-205ENST00000563854 CD52P31358 61 aa20.05■□□□□ 0.8
NME3-205ENST00000563854 SLC26A2P50443 739 aa20.05■□□□□ 0.8
NME3-205ENST00000563854 HTRA4P83105 476 aaPredicted RBP20.05■□□□□ 0.8
NME3-205ENST00000563854 TFF2Q03403 129 aa20.05■□□□□ 0.8
NME3-205ENST00000563854 IER5Q5VY09 327 aa20.05■□□□□ 0.8
NME3-205ENST00000563854 TSHZ1Q6ZSZ6 1077 aa20.05■□□□□ 0.8
NME3-205ENST00000563854 ZNF274Q96GC6 653 aaPredicted RBP20.05■□□□□ 0.8
NME3-205ENST00000563854 SUGCTQ9HAC7 445 aa20.05■□□□□ 0.8
NME3-205ENST00000563854 TBC1D22BQ9NU19 505 aa20.05■□□□□ 0.8
NME3-205ENST00000563854 PCDHA2Q9Y5H9 948 aa20.05■□□□□ 0.8
NME3-205ENST00000563854 REV3LO60673 3130 aa20.04■□□□□ 0.8
NME3-205ENST00000563854 IGKV6D-21A0A0A0MT36 114 aa20.04■□□□□ 0.8
NME3-205ENST00000563854 HBP1O60381 514 aa20.04■□□□□ 0.8
NME3-205ENST00000563854 DEXIO95424 95 aa20.04■□□□□ 0.8
NME3-205ENST00000563854 RPLP2P05387 115 aaKnown RBP20.04■□□□□ 0.8
NME3-205ENST00000563854 POU3F3P20264 500 aaPredicted RBP20.04■□□□□ 0.8
NME3-205ENST00000563854 IBSPP21815 317 aaPredicted RBP20.04■□□□□ 0.8
NME3-205ENST00000563854 MTHFD1LQ6UB35 978 aa20.04■□□□□ 0.8
NME3-205ENST00000563854 ATP8B4Q8TF62 1192 aa20.04■□□□□ 0.8
NME3-205ENST00000563854 SH3GLB2Q9NR46 395 aa20.04■□□□□ 0.8
NME3-205ENST00000563854 GINS2Q9Y248 185 aa20.04■□□□□ 0.8
NME3-205ENST00000563854 PRRC2BQ5JSZ5 2229 aaKnown RBP20.04■□□□□ 0.8
NME3-205ENST00000563854 KLRC1P26715 233 aa20.03■□□□□ 0.8
NME3-205ENST00000563854 KRT76Q01546 638 aa20.03■□□□□ 0.8
NME3-205ENST00000563854 ZNF746Q6NUN9 644 aaPredicted RBP20.03■□□□□ 0.8
NME3-205ENST00000563854 SP7Q8TDD2 431 aaPredicted RBP20.03■□□□□ 0.8
NME3-205ENST00000563854 AIFM3Q96NN9 605 aa20.03■□□□□ 0.8
NME3-205ENST00000563854 PPP1R16BQ96T49 567 aa20.03■□□□□ 0.8
NME3-205ENST00000563854 AGO3Q9H9G7 860 aaKnown RBP20.03■□□□□ 0.8
NME3-205ENST00000563854 PCDHA4Q9UN74 947 aa20.03■□□□□ 0.8
NME3-205ENST00000563854 SMIM35A0A1B0GVV1 85 aa20.02■□□□□ 0.8
NME3-205ENST00000563854 CHMP2AO43633 222 aa20.02■□□□□ 0.8
NME3-205ENST00000563854 DTNBO60941 627 aa20.02■□□□□ 0.8
NME3-205ENST00000563854 PSAPP07602 524 aa20.02■□□□□ 0.8
NME3-205ENST00000563854 CIITAP33076 1130 aa20.02■□□□□ 0.8
NME3-205ENST00000563854 TBCKQ8TEA7 893 aa20.02■□□□□ 0.8
NME3-205ENST00000563854 LENG9Q96B70 501 aa20.02■□□□□ 0.8
NME3-205ENST00000563854 GABBR1Q9UBS5 961 aa20.02■□□□□ 0.8
NME3-205ENST00000563854 COL1A2P08123 1366 aa20.01■□□□□ 0.79
NME3-205ENST00000563854 PAK2Q13177 524 aa20.01■□□□□ 0.79
NME3-205ENST00000563854 TMEM266Q2M3C6 531 aa20.01■□□□□ 0.79
NME3-205ENST00000563854 EPC2Q52LR7 807 aa20.01■□□□□ 0.79
NME3-205ENST00000563854 ZNF484Q5JVG2 852 aa20.01■□□□□ 0.79
NME3-205ENST00000563854 SMAP1Q8IYB5 467 aaPredicted RBP20.01■□□□□ 0.79
NME3-205ENST00000563854 BLIDQ8IZY5 108 aa20.01■□□□□ 0.79
NME3-205ENST00000563854 ADAMTS19Q8TE59 1207 aa20.01■□□□□ 0.79
NME3-205ENST00000563854 IL17RAQ96F46 866 aa20.01■□□□□ 0.79
NME3-205ENST00000563854 CELF4Q9BZC1 486 aaKnown RBP20.01■□□□□ 0.79
NME3-205ENST00000563854 SLKQ9H2G2 1235 aaPredicted RBP20.01■□□□□ 0.79
NME3-205ENST00000563854 PCDHA10Q9Y5I2 948 aa20.01■□□□□ 0.79
NME3-205ENST00000563854 SPTBN5Q9NRC6 3674 aaKnown RBP20■□□□□ 0.79
NME3-205ENST00000563854 WDR64B1ANS9 1081 aa20■□□□□ 0.79
NME3-205ENST00000563854 ENPP3O14638 875 aa20■□□□□ 0.79
NME3-205ENST00000563854 MSH4O15457 936 aa20■□□□□ 0.79
NME3-205ENST00000563854 GAS7O60861 476 aa20■□□□□ 0.79
NME3-205ENST00000563854 ATP4AP20648 1035 aa20■□□□□ 0.79
NME3-205ENST00000563854 KCNQ1P51787 676 aa20■□□□□ 0.79
NME3-205ENST00000563854 SCRN1Q12765 414 aa20■□□□□ 0.79
NME3-205ENST00000563854 FIBCD1Q8N539 461 aa20■□□□□ 0.79
NME3-205ENST00000563854 LINC01599Q8WXQ3 324 aa20■□□□□ 0.79
NME3-205ENST00000563854 GJA10Q969M2 543 aa20■□□□□ 0.79
NME3-205ENST00000563854 SAMD11Q96NU1 681 aa20■□□□□ 0.79
NME3-205ENST00000563854 PADI3Q9ULW8 664 aa20■□□□□ 0.79
NME3-205ENST00000563854 KCNJ14Q9UNX9 436 aa20■□□□□ 0.79
NME3-205ENST00000563854 IGSF9BQ9UPX0 1349 aa20■□□□□ 0.79
NME3-205ENST00000563854 CDKL5O76039 1030 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 TDP2O95551 362 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 CTNNB1P35222 781 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 USP11P51784 963 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 NFX1Q12986 1120 aaKnown RBP19.99■□□□□ 0.79
NME3-205ENST00000563854 AAK1Q2M2I8 961 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 LRCH2Q5VUJ6 765 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 TMEM192Q8IY95 271 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 NME8Q8N427 588 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 METTL13Q8N6R0 699 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 BBXQ8WY36 941 aaPredicted RBP19.99■□□□□ 0.79
NME3-205ENST00000563854 HLA-CQ95604 372 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 TEKT3Q9BXF9 490 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 C22orf23Q9BZE7 217 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 MAFBQ9Y5Q3 323 aaPredicted RBP19.99■□□□□ 0.79
NME3-205ENST00000563854 ADGRA3Q8IWK6 1321 aa19.99■□□□□ 0.79
NME3-205ENST00000563854 ZBTB42B2RXF5 422 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 EDIL3O43854 480 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 GPM6BQ13491 265 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 ERICH6BQ5W0A0 696 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms