RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 BBXQ8WY36 941 aaPredicted RBP15.12■□□□□ 0.01
CLK3-213ENST00000563842 WNT8BQ93098 351 aa15.12■□□□□ 0.01
CLK3-213ENST00000563842 FAM167AQ96KS9 214 aa15.12■□□□□ 0.01
CLK3-213ENST00000563842 FAM20AQ96MK3 541 aa15.12■□□□□ 0.01
CLK3-213ENST00000563842 UIMC1Q96RL1 719 aa15.12■□□□□ 0.01
CLK3-213ENST00000563842 SLC9A7Q96T83 725 aa15.12■□□□□ 0.01
CLK3-213ENST00000563842 MSRAQ9UJ68 235 aa15.12■□□□□ 0.01
CLK3-213ENST00000563842 CEP131Q9UPN4 1083 aa15.12■□□□□ 0.01
CLK3-213ENST00000563842 MAFBQ9Y5Q3 323 aaPredicted RBP15.12■□□□□ 0.01
CLK3-213ENST00000563842 ABHD14A-ACY1A0A1B0GW23 586 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 NBNO60934 754 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 PSMD10O75832 226 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 BAG4O95429 457 aaKnown RBP15.11■□□□□ 0.01
CLK3-213ENST00000563842 KCNJ6P48051 423 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 NR5A1Q13285 461 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 IKBKEQ14164 716 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 FAM26DQ5JW98 314 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 MIER3Q7Z3K6 550 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 ETNPPLQ8TBG4 499 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 VWCEQ96DN2 955 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 NRBP2Q9NSY0 501 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 CXXC1Q9P0U4 656 aaPredicted RBP15.11■□□□□ 0.01
CLK3-213ENST00000563842 GABBR1Q9UBS5 961 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 PCDHA2Q9Y5H9 948 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 GTF3C3Q9Y5Q9 886 aa15.11■□□□□ 0.01
CLK3-213ENST00000563842 BTBD18B2RXH4 712 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 M0QZ92 97 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 ATP2A2P16615 1042 aaKnown RBP15.1■□□□□ 0.01
CLK3-213ENST00000563842 DNAJB2P25686 324 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 MARCH8Q5T0T0 291 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 IER5Q5VY09 327 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 SLFN12Q8IYM2 578 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 NME8Q8N427 588 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 SEPT8Q92599 483 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 TNFRSF25Q93038 417 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 BACH2Q9BYV9 841 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 UNC45AQ9H3U1 944 aa15.1■□□□□ 0.01
CLK3-213ENST00000563842 SIP14410 1827 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 SMIM35A0A1B0GVV1 85 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 KIF28PB7ZC32 967 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 CHMP2AO43633 222 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 SLC37A4O43826 429 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 DKC1O60832 514 aaKnown RBP eCLIP15.09■□□□□ 0.01
CLK3-213ENST00000563842 CTSHP09668 335 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 FOSBP53539 338 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 GNL2Q13823 731 aaKnown RBP15.09■□□□□ 0.01
CLK3-213ENST00000563842 GPNMBQ14956 572 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 MTHFD1LQ6UB35 978 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 FBXO18Q8NFZ0 1043 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 DNAJB3Q8WWF6 145 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 APBB2Q92870 758 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 TIFAQ96CG3 184 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 FOXP1Q9H334 677 aaPredicted RBP15.09■□□□□ 0.01
CLK3-213ENST00000563842 KCNMB3Q9NPA1 279 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 MTMR10Q9NXD2 777 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 IGSF9BQ9UPX0 1349 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 PTPRSQ13332 1948 aa15.09■□□□□ 0.01
CLK3-213ENST00000563842 LAMA2P24043 3122 aaKnown RBP15.09■□□□□ 0.01
CLK3-213ENST00000563842 MAGEB2O15479 319 aa15.08■□□□□ 0
CLK3-213ENST00000563842 ATP4AP20648 1035 aa15.08■□□□□ 0
CLK3-213ENST00000563842 KLRC1P26715 233 aa15.08■□□□□ 0
CLK3-213ENST00000563842 MBTPS1Q14703 1052 aa15.08■□□□□ 0
CLK3-213ENST00000563842 PLEKHG4Q58EX7 1191 aa15.08■□□□□ 0
CLK3-213ENST00000563842 B3GNT9Q6UX72 402 aa15.08■□□□□ 0
CLK3-213ENST00000563842 RUFY4Q6ZNE9 571 aa15.08■□□□□ 0
CLK3-213ENST00000563842 TMX3Q96JJ7 454 aa15.08■□□□□ 0
CLK3-213ENST00000563842 PBX4Q9BYU1 374 aa15.08■□□□□ 0
CLK3-213ENST00000563842 SEMA6BQ9H3T3 888 aa15.08■□□□□ 0
CLK3-213ENST00000563842 PCDHA11Q9Y5I1 949 aa15.08■□□□□ 0
CLK3-213ENST00000563842 SQORQ9Y6N5 450 aa15.08■□□□□ 0
CLK3-213ENST00000563842 GRXCR1A8MXD5 290 aa15.07■□□□□ 0
CLK3-213ENST00000563842 OATP04181 439 aa15.07■□□□□ 0
CLK3-213ENST00000563842 MRPS6P82932 125 aaKnown RBP15.07■□□□□ 0
CLK3-213ENST00000563842 GUCY1B3Q02153 619 aa15.07■□□□□ 0
CLK3-213ENST00000563842 PPP2R5CQ13362 524 aa15.07■□□□□ 0
CLK3-213ENST00000563842 EARS2Q5JPH6 523 aaKnown RBP15.07■□□□□ 0
CLK3-213ENST00000563842 FAM43BQ6ZT52 329 aaPredicted RBP15.07■□□□□ 0
CLK3-213ENST00000563842 Q7L0L9 218 aa15.07■□□□□ 0
CLK3-213ENST00000563842 ZNF710Q8N1W2 664 aa15.07■□□□□ 0
CLK3-213ENST00000563842 USP38Q8NB14 1042 aa15.07■□□□□ 0
CLK3-213ENST00000563842 DBF4BQ8NFT6 615 aa15.07■□□□□ 0
CLK3-213ENST00000563842 TRAPPC12Q8WVT3 735 aa15.07■□□□□ 0
CLK3-213ENST00000563842 FAM49AQ9H0Q0 323 aaPredicted RBP15.07■□□□□ 0
CLK3-213ENST00000563842 SLC28A3Q9HAS3 691 aa15.07■□□□□ 0
CLK3-213ENST00000563842 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.07■□□□□ 0
CLK3-213ENST00000563842 CDY2AQ9Y6F7 541 aa15.07■□□□□ 0
CLK3-213ENST00000563842 CHRNA1P02708 482 aa15.06■□□□□ 0
CLK3-213ENST00000563842 TMOD1P28289 359 aa15.06■□□□□ 0
CLK3-213ENST00000563842 WDR5P61964 334 aaKnown RBP15.06■□□□□ 0
CLK3-213ENST00000563842 PSMC5P62195 406 aa15.06■□□□□ 0
CLK3-213ENST00000563842 PRKCEQ02156 737 aa15.06■□□□□ 0
CLK3-213ENST00000563842 MGAT3Q09327 533 aa15.06■□□□□ 0
CLK3-213ENST00000563842 ORC2Q13416 577 aaPredicted RBP15.06■□□□□ 0
CLK3-213ENST00000563842 CALCRLQ16602 461 aa15.06■□□□□ 0
CLK3-213ENST00000563842 XKR3Q5GH77 459 aa15.06■□□□□ 0
CLK3-213ENST00000563842 GJA10Q969M2 543 aa15.06■□□□□ 0
CLK3-213ENST00000563842 IFIH1Q9BYX4 1025 aaKnown RBP15.06■□□□□ 0
CLK3-213ENST00000563842 ZNF576Q9H609 170 aa15.06■□□□□ 0
CLK3-213ENST00000563842 TRPV2Q9Y5S1 764 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms