RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ZBTB41Q5SVQ8 909 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 TMC5Q6UXY8 1006 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 CERS3Q8IU89 383 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 MRPS27Q92552 414 aaKnown RBP12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 CRELD1Q96HD1 420 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 LTB4R2Q9NPC1 389 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 RAXQ9Y2V3 346 aa12.85□□□□□ -0.35
HDGFL3-204ENST00000563790 WDR81Q562E7 1941 aa12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 RAD21O60216 631 aa12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 ARID4AP29374 1257 aaPredicted RBP12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 IL15P40933 162 aaPredicted RBP12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 ALDH5A1P51649 535 aaPredicted RBP12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 PPP2R5DQ14738 602 aa12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 RSPO2Q6UXX9 243 aaPredicted RBP12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 KIFC2Q96AC6 838 aa12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 ARRDC1-AS1Q9H2J1 176 aa12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 CCDC86Q9H6F5 360 aaKnown RBP12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 ADD3Q9UEY8 706 aaKnown RBP12.84□□□□□ -0.35
HDGFL3-204ENST00000563790 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 SNW1Q13573 536 aaKnown RBP12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 MLF2Q15773 248 aaPredicted RBP12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 DGKDQ16760 1214 aa12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 TKFCQ3LXA3 575 aa12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 COLEC12Q5KU26 742 aa12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 PLA2G2CQ5R387 149 aa12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 DAB2IPQ5VWQ8 1189 aa12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 NPAS4Q8IUM7 802 aa12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 SLC4A5Q9BY07 1137 aa12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 PUF60Q9UHX1 559 aaKnown RBP12.83□□□□□ -0.36
HDGFL3-204ENST00000563790 C2orf71A6NGG8 1288 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 NCAM2O15394 837 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 IGSF3O75054 1194 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 ARIH2O95376 493 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 HOXC8P31273 242 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 PLCB3Q01970 1234 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 FAM26DQ5JW98 314 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 MRPL43Q8N983 215 aaKnown RBP12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 LOXL4Q96JB6 756 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 TRERF1Q96PN7 1200 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 KANSL2Q9H9L4 492 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 SWAP70Q9UH65 585 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 COL5A1P20908 1838 aaPredicted RBP12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 KNTC1P50748 2209 aa12.82□□□□□ -0.36
HDGFL3-204ENST00000563790 CRYBG3Q68DQ2 2970 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 C4orf47A7E2U8 309 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 PYCARD-AS1I3L0S3 204 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 FDX1P10109 184 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 FGD1P98174 961 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 ARHGAP1Q07960 439 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 SRSF5Q13243 272 aaKnown RBP12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 TMC7Q7Z402 723 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 COLGALT1Q8NBJ5 622 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 LINC01599Q8WXQ3 324 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 BBXQ8WY36 941 aaPredicted RBP12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 ATP6V0A1Q93050 837 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 TSR2Q969E8 191 aaKnown RBP12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 NELL2Q99435 816 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 CCDC8Q9H0W5 538 aaPredicted RBP12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 EHMT1Q9H9B1 1298 aa12.81□□□□□ -0.36
HDGFL3-204ENST00000563790 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 CAPN9O14815 690 aa12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 AXIN1O15169 862 aa12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 EPN2O95208 641 aa12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 TARSP26639 723 aaKnown RBP12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 GBP2P32456 591 aaPredicted RBP12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 GATMP50440 423 aa12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 CFHR1Q03591 330 aa12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 FZD5Q13467 585 aa12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 SPOUT1Q5T280 376 aaKnown RBP12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 CCDC62Q6P9F0 684 aa12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 EDEM2Q9BV94 578 aa12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 SFXN1Q9H9B4 322 aa12.8□□□□□ -0.36
HDGFL3-204ENST00000563790 CELSR1Q9NYQ6 3014 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 SPG11Q96JI7 2443 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 GON4LQ3T8J9 2241 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 ANHXE9PGG2 379 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 GH1P01241 217 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 STAG3L1P0CL83 205 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 EPCAMP16422 314 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 MUM1L1Q5H9M0 696 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 C15orf39Q6ZRI6 1047 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 JADE2Q9NQC1 790 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 FAM217BQ9NTX9 383 aaPredicted RBP12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 FEM1BQ9UK73 627 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 ICE1Q9Y2F5 2266 aa12.79□□□□□ -0.36
HDGFL3-204ENST00000563790 F8P00451 2351 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 FAM205CA6NFA0 338 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 H0Y626 953 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 MAFO75444 373 aaPredicted RBP12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 TRIM16O95361 564 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 NDUFB10O96000 172 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 GHRP10912 638 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 CD72P21854 359 aa12.78□□□□□ -0.36
HDGFL3-204ENST00000563790 PDE4AP27815 886 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms