RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 VAV3Q9UKW4 847 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 PCDHA2Q9Y5H9 948 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 PCDHA10Q9Y5I2 948 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 SLC4A7Q9Y6M7 1214 aa16.76■□□□□ 0.27
RPUSD1-204ENST00000563560 POTEB3A0JP26 581 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 RRN3P2A6NIE6 340 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 MYOGP15173 224 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 RABGGTBP53611 331 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 DEFB103AP81534 67 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 ZNF697Q5TEC3 545 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 KRT40Q6A162 431 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 SWSAP1Q6NVH7 229 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 MIS18BP1Q6P0N0 1132 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 TAF2Q6P1X5 1199 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 POTEBQ6S5H4 581 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 LINC01465Q8N7H1 131 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 DBF4BQ8NFT6 615 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 SLC9A7Q96T83 725 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 MTIF3Q9H2K0 278 aaKnown RBP16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 AZI2Q9H6S1 392 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 ZNF302Q9NR11 478 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 STXBP5LQ9Y2K9 1186 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 COL1A2P08123 1366 aa16.75■□□□□ 0.27
RPUSD1-204ENST00000563560 BTBD18B2RXH4 712 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 ATP2A2P16615 1042 aaKnown RBP16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 SPIRE1Q08AE8 756 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 GRIN2CQ14957 1233 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 RABEP1Q15276 862 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 LRCH2Q5VUJ6 765 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 MTHFD1LQ6UB35 978 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 PIK3AP1Q6ZUJ8 805 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 NEK8Q86SG6 692 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 DNAJB3Q8WWF6 145 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 TIFAQ96CG3 184 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 FAM161BQ96MY7 647 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 CDX2Q99626 313 aaPredicted RBP16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 FTOQ9C0B1 505 aaKnown RBP eCLIP16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 PCDHA11Q9Y5I1 949 aa16.74■□□□□ 0.27
RPUSD1-204ENST00000563560 NLRC5Q86WI3 1866 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 SMIM35A0A1B0GVV1 85 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 WDR64B1ANS9 1081 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 HBP1O60381 514 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 C22orf31O95567 290 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 CTSHP09668 335 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 ACTN1P12814 892 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 XBP1P17861 261 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 KRT2P35908 639 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 LPIN1Q14693 890 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 TARBP2Q15633 366 aaKnown RBP16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 RAB30Q15771 203 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 LETM2Q2VYF4 491 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 FAM160B1Q5W0V3 765 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 PDXDC2PQ6P474 469 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 TMCO2Q7Z6W1 182 aaPredicted RBP16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 HERC6Q8IVU3 1022 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 RDM1Q8NG50 284 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 BBXQ8WY36 941 aaPredicted RBP16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 ZSCAN31Q96LW9 406 aaPredicted RBP16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 ZNF576Q9H609 170 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 SH2B1Q9NRF2 756 aaPredicted RBP16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 DISC1Q9NRI5 854 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 GABBR1Q9UBS5 961 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 DDX25Q9UHL0 483 aaKnown RBP16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
RPUSD1-204ENST00000563560 KDM3AQ9Y4C1 1321 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 ATG2AQ2TAZ0 1938 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 CCDC194A0A1B0GVG4 234 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 ZBBXA8MT70 800 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 EML1O00423 815 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 GAS7O60861 476 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 PSAPP07602 524 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 GCFC2P16383 781 aaKnown RBP16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 SFNP31947 248 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 IGBP1P78318 339 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 PPP2R5CQ13362 524 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 ZNF484Q5JVG2 852 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 FBXO47Q5MNV8 452 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 DIS3L2Q8IYB7 885 aaKnown RBP16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 KIAA0319LQ8IZA0 1049 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 CRIPAKQ8N1N5 446 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 FAM20AQ96MK3 541 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 TEKT3Q9BXF9 490 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 NKX2-4Q9H2Z4 354 aa16.72■□□□□ 0.27
RPUSD1-204ENST00000563560 KIAA1671Q9BY89 1806 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 BACH1O14867 736 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 TBX3O15119 743 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 JAK3P52333 1124 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 MRPS6P82932 125 aaKnown RBP16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 SPRED2Q7Z698 418 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 IL27Q8NEV9 243 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 FBXO18Q8NFZ0 1043 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 AGO3Q9H9G7 860 aaKnown RBP16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 CDY2AQ9Y6F7 541 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 RALGAPA2Q2PPJ7 1873 aa16.71■□□□□ 0.27
RPUSD1-204ENST00000563560 GJB5O95377 273 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms