RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 PRAMEF18Q5VWM3 479 aa4.34□□□□□ -1.72
LINC01416-201ENST00000563553 ANKS3Q6ZW76 656 aa4.34□□□□□ -1.72
LINC01416-201ENST00000563553 OTOP3Q7RTS5 596 aa4.34□□□□□ -1.72
LINC01416-201ENST00000563553 VPS37DQ86XT2 251 aa4.34□□□□□ -1.72
LINC01416-201ENST00000563553 PHOSPHO1Q8TCT1 267 aa4.34□□□□□ -1.72
LINC01416-201ENST00000563553 PPP1R9BQ96SB3 815 aa4.34□□□□□ -1.72
LINC01416-201ENST00000563553 GRPEL1Q9HAV7 217 aa4.34□□□□□ -1.72
LINC01416-201ENST00000563553 ADGRL1O94910 1474 aa4.34□□□□□ -1.72
LINC01416-201ENST00000563553 CEP170Q5SW79 1584 aa4.34□□□□□ -1.72
LINC01416-201ENST00000563553 ABCC2Q92887 1545 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 PZPP20742 1482 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 DAPK1P53355 1430 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 NCOA3Q9Y6Q9 1424 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 USP19O94966 1318 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 CGNL1Q0VF96 1302 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 BLACEA4D250 179 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 NKRFO15226 690 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC01416-201ENST00000563553 LAMTOR5O43504 91 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 DNAJA1P31689 397 aaKnown RBP4.33□□□□□ -1.72
LINC01416-201ENST00000563553 CYP4F22Q6NT55 531 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 LBX2Q6XYB7 198 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 NUDT10Q8NFP7 164 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 NUDT11Q96G61 164 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 LOXL4Q96JB6 756 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 TMEM209Q96SK2 561 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 GPR20Q99678 358 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 YIPF4Q9BSR8 244 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 NESP48681 1621 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 DNMBPQ6XZF7 1577 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 DYNC1I1O14576 645 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 FGFR1P11362 822 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 GRIN1Q05586 938 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 R3HDM1Q15032 1099 aaKnown RBP4.33□□□□□ -1.72
LINC01416-201ENST00000563553 BORAQ6PGQ7 559 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 RSPO2Q6UXX9 243 aaPredicted RBP4.33□□□□□ -1.72
LINC01416-201ENST00000563553 USP53Q70EK8 1073 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 ZSCAN30Q86W11 494 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 Q8N1X5 172 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 UHMK1Q8TAS1 419 aaKnown RBP4.33□□□□□ -1.72
LINC01416-201ENST00000563553 CLIC6Q96NY7 704 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 CROTQ9UKG9 612 aa4.33□□□□□ -1.72
LINC01416-201ENST00000563553 EIF2AK4Q9P2K8 1649 aaKnown RBP4.32□□□□□ -1.72
LINC01416-201ENST00000563553 WDR62O43379 1518 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 TCRBV5S4A2TA0A5A2 114 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 KIF20AO95235 890 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 TNNT2P45379 298 aaPredicted RBP4.32□□□□□ -1.72
LINC01416-201ENST00000563553 EPHB4P54760 987 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 STYK1Q6J9G0 422 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 SLC43A3Q8NBI5 491 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 SH3RF2Q8TEC5 729 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 SGSM3Q96HU1 749 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 GTPBP4Q9BZE4 634 aaKnown RBP4.32□□□□□ -1.72
LINC01416-201ENST00000563553 L2HGDHQ9H9P8 463 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 CROCC2H7BZ55 1655 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 SHROOM2Q13796 1616 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 AATKQ6ZMQ8 1374 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 ITSN2Q9NZM3 1697 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 ACOT7O00154 380 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 AKAP8O43823 692 aaKnown RBP4.32□□□□□ -1.72
LINC01416-201ENST00000563553 ZNF500O60304 480 aaPredicted RBP4.32□□□□□ -1.72
LINC01416-201ENST00000563553 KNG1P01042 644 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 PABPC1P11940 636 aaKnown RBP4.32□□□□□ -1.72
LINC01416-201ENST00000563553 COL6A2P12110 1019 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 KBTBD2Q8IY47 623 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 ANP32BQ92688 251 aaKnown RBP4.32□□□□□ -1.72
LINC01416-201ENST00000563553 TMEM168Q9H0V1 697 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 KCND1Q9NSA2 647 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 MSRB2Q9Y3D2 182 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 LAMC3Q9Y6N6 1575 aa4.32□□□□□ -1.72
LINC01416-201ENST00000563553 GPRASP1Q5JY77 1395 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 ZNF521Q96K83 1311 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 PATE3B3GLJ2 98 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 PRODHO43272 600 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 ADCY3O60266 1144 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 IL18BPO95998 194 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 GRK2P25098 689 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 GRK3P35626 688 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 EPHA5P54756 1037 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 TUSC3Q13454 348 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 CD276Q5ZPR3 534 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 FAM124AQ86V42 546 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 AARSD1Q9BTE6 412 aaKnown RBP4.31□□□□□ -1.72
LINC01416-201ENST00000563553 ADAM29Q9UKF5 820 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 UHRF1BP1LA0JNW5 1464 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 SHANK2Q9UPX8 1470 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 EIF4G3O43432 1585 aaKnown RBP4.31□□□□□ -1.72
LINC01416-201ENST00000563553 REREQ9P2R6 1566 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 MAGI3Q5TCQ9 1506 aa4.31□□□□□ -1.72
LINC01416-201ENST00000563553 CYP1A1P04798 512 aaPredicted RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 FAHP16930 419 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 ZXDAP98168 799 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 DMTNQ08495 405 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 NFATC3Q12968 1075 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 GNL2Q13823 731 aaKnown RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 RAB33AQ14088 237 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 SPRED1Q7Z699 444 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 KLHL36Q8N4N3 616 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 DCAF4Q8WV16 495 aa4.3□□□□□ -1.72
LINC01416-201ENST00000563553 DVL3Q92997 716 aaPredicted RBP4.3□□□□□ -1.72
LINC01416-201ENST00000563553 GBP4Q96PP9 640 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms