RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 GAS7O60861 476 aa21.51■■□□□ 1.03
TRADD-203ENST00000563348 RBM25P49756 843 aaKnown RBP21.51■■□□□ 1.03
TRADD-203ENST00000563348 MGAT3Q09327 533 aa21.51■■□□□ 1.03
TRADD-203ENST00000563348 ST3GAL1Q11201 340 aa21.51■■□□□ 1.03
TRADD-203ENST00000563348 LRCH2Q5VUJ6 765 aa21.51■■□□□ 1.03
TRADD-203ENST00000563348 TRAPPC12Q8WVT3 735 aa21.51■■□□□ 1.03
TRADD-203ENST00000563348 SEPT8Q92599 483 aa21.51■■□□□ 1.03
TRADD-203ENST00000563348 ZBTB10Q96DT7 871 aa21.51■■□□□ 1.03
TRADD-203ENST00000563348 CHD9Q3L8U1 2897 aa21.51■■□□□ 1.03
TRADD-203ENST00000563348 PSMD10O75832 226 aa21.5■■□□□ 1.03
TRADD-203ENST00000563348 DEFB103AP81534 67 aa21.5■■□□□ 1.03
TRADD-203ENST00000563348 MKRN4PQ13434 485 aaPredicted RBP21.5■■□□□ 1.03
TRADD-203ENST00000563348 ZNF484Q5JVG2 852 aa21.5■■□□□ 1.03
TRADD-203ENST00000563348 MTHFD1LQ6UB35 978 aa21.5■■□□□ 1.03
TRADD-203ENST00000563348 GJA10Q969M2 543 aa21.5■■□□□ 1.03
TRADD-203ENST00000563348 TEKT3Q9BXF9 490 aa21.5■■□□□ 1.03
TRADD-203ENST00000563348 DISC1Q9NRI5 854 aa21.5■■□□□ 1.03
TRADD-203ENST00000563348 GABBR1Q9UBS5 961 aa21.5■■□□□ 1.03
TRADD-203ENST00000563348 DDX25Q9UHL0 483 aaKnown RBP21.5■■□□□ 1.03
TRADD-203ENST00000563348 SAMM50Q9Y512 469 aa21.5■■□□□ 1.03
TRADD-203ENST00000563348 SMIM35A0A1B0GVV1 85 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 KLRC1P26715 233 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 SFNP31947 248 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 LETM2Q2VYF4 491 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 PPP4R3AQ6IN85 833 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 PIK3AP1Q6ZUJ8 805 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 NEK8Q86SG6 692 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 CKAP2LQ8IYA6 745 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 ETNPPLQ8TBG4 499 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 BBXQ8WY36 941 aaPredicted RBP21.49■■□□□ 1.03
TRADD-203ENST00000563348 ZSCAN31Q96LW9 406 aaPredicted RBP21.49■■□□□ 1.03
TRADD-203ENST00000563348 FAM49AQ9H0Q0 323 aaPredicted RBP21.49■■□□□ 1.03
TRADD-203ENST00000563348 UNC45AQ9H3U1 944 aa21.49■■□□□ 1.03
TRADD-203ENST00000563348 COL1A2P08123 1366 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 CA3P07451 260 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 KRT2P35908 639 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 JAK3P52333 1124 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 MRPS6P82932 125 aaKnown RBP21.48■■□□□ 1.03
TRADD-203ENST00000563348 IER5Q5VY09 327 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 PPP2R2DQ66LE6 453 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 B3GNT9Q6UX72 402 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.48■■□□□ 1.03
TRADD-203ENST00000563348 NME8Q8N427 588 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 RDM1Q8NG50 284 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 APBB2Q92870 758 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 BRMS1Q9HCU9 246 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 CDY2AQ9Y6F7 541 aa21.48■■□□□ 1.03
TRADD-203ENST00000563348 ZBTB42B2RXF5 422 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 SLC37A4O43826 429 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 TLL1O43897 1013 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 GJB5O95377 273 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 FOSL2P15408 326 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 GCFC2P16383 781 aaKnown RBP21.47■■□□□ 1.03
TRADD-203ENST00000563348 NR5A1Q13285 461 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 LPIN1Q14693 890 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 EARS2Q5JPH6 523 aaKnown RBP21.47■■□□□ 1.03
TRADD-203ENST00000563348 TMCO2Q7Z6W1 182 aaPredicted RBP21.47■■□□□ 1.03
TRADD-203ENST00000563348 CCDC83Q8IWF9 413 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 TNFRSF25Q93038 417 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 NAP1L4Q99733 375 aaKnown RBP21.47■■□□□ 1.03
TRADD-203ENST00000563348 LLPHQ9BRT6 129 aaKnown RBP21.47■■□□□ 1.03
TRADD-203ENST00000563348 ZBED2Q9BTP6 218 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 IFIH1Q9BYX4 1025 aaKnown RBP21.47■■□□□ 1.03
TRADD-203ENST00000563348 PRDM12Q9H4Q4 367 aa21.47■■□□□ 1.03
TRADD-203ENST00000563348 CHMP2AO43633 222 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 ZNF862O60290 1169 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 MMP1P03956 469 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 AMHP03971 560 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 GHRP10912 638 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 FBXO47Q5MNV8 452 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 KRT40Q6A162 431 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 FAM167AQ96KS9 214 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 FAM20AQ96MK3 541 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 RAD9AQ99638 391 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 KCNMB3Q9NPA1 279 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 SH2B1Q9NRF2 756 aaPredicted RBP21.46■■□□□ 1.03
TRADD-203ENST00000563348 NRBP2Q9NSY0 501 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 SQORQ9Y6N5 450 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 IGSF9BQ9UPX0 1349 aa21.46■■□□□ 1.03
TRADD-203ENST00000563348 BTBD18B2RXH4 712 aa21.45■■□□□ 1.02
TRADD-203ENST00000563348 CCNT1O60563 726 aaKnown RBP21.45■■□□□ 1.02
TRADD-203ENST00000563348 TRIM29Q14134 588 aa21.45■■□□□ 1.02
TRADD-203ENST00000563348 TRMT1LQ7Z2T5 733 aaKnown RBP21.45■■□□□ 1.02
TRADD-203ENST00000563348 MIER3Q7Z3K6 550 aa21.45■■□□□ 1.02
TRADD-203ENST00000563348 KIAA0319LQ8IZA0 1049 aa21.45■■□□□ 1.02
TRADD-203ENST00000563348 GAS2L1Q99501 681 aaPredicted RBP21.45■■□□□ 1.02
TRADD-203ENST00000563348 CEP131Q9UPN4 1083 aa21.45■■□□□ 1.02
TRADD-203ENST00000563348 TRPV2Q9Y5S1 764 aa21.45■■□□□ 1.02
TRADD-203ENST00000563348 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.44■■□□□ 1.02
TRADD-203ENST00000563348 M0QZ92 97 aa21.44■■□□□ 1.02
TRADD-203ENST00000563348 TAP1Q03518 808 aa21.44■■□□□ 1.02
TRADD-203ENST00000563348 TMEM62Q0P6H9 643 aa21.44■■□□□ 1.02
TRADD-203ENST00000563348 RABEP1Q15276 862 aa21.44■■□□□ 1.02
TRADD-203ENST00000563348 DIS3L2Q8IYB7 885 aaKnown RBP21.44■■□□□ 1.02
TRADD-203ENST00000563348 MYOCDQ8IZQ8 938 aa21.44■■□□□ 1.02
TRADD-203ENST00000563348 USP38Q8NB14 1042 aa21.44■■□□□ 1.02
TRADD-203ENST00000563348 MAFAQ8NHW3 353 aaPredicted RBP21.44■■□□□ 1.02
TRADD-203ENST00000563348 CELF4Q9BZC1 486 aaKnown RBP21.44■■□□□ 1.02
TRADD-203ENST00000563348 KDM3AQ9Y4C1 1321 aa21.44■■□□□ 1.02
TRADD-203ENST00000563348 GBF1Q92538 1859 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms