RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 CTDNEP1O95476 244 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 MRPS6P82932 125 aaKnown RBP13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 HTRA4P83105 476 aaPredicted RBP13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 ADGRE1Q14246 886 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 NONOQ15233 471 aaKnown RBP eCLIP13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 SWSAP1Q6NVH7 229 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 MTHFD1LQ6UB35 978 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 TSHZ1Q6ZSZ6 1077 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 DNAJB3Q8WWF6 145 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 BBXQ8WY36 941 aaPredicted RBP13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 FAM167AQ96KS9 214 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 AIFM3Q96NN9 605 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 ZBED2Q9BTP6 218 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 ORC3Q9UBD5 711 aaPredicted RBP13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 INSL6Q9Y581 213 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 IGSF9BQ9UPX0 1349 aa13.83□□□□□ -0.2
NSMCE1-204ENST00000563273 TET1Q8NFU7 2136 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 GAS7O60861 476 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 PSMD10O75832 226 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 SEC24BO95487 1268 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 GCFC2P16383 781 aaKnown RBP13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 NEK4P51957 841 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 JAK3P52333 1124 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 IGBP1P78318 339 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 LPIN1Q14693 890 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 ME3Q16798 604 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 FBXO47Q5MNV8 452 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 PPP4R3AQ6IN85 833 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 B3GNT9Q6UX72 402 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 ZNF710Q8N1W2 664 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 TOP1MTQ969P6 601 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 NAP1L4Q99733 375 aaKnown RBP13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 TEKT3Q9BXF9 490 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 TRPV2Q9Y5S1 764 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 CDY2AQ9Y6F7 541 aa13.82□□□□□ -0.2
NSMCE1-204ENST00000563273 CCDC194A0A1B0GVG4 234 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 ZBTB42B2RXF5 422 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 M0QZ92 97 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 GHRP10912 638 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 ATP4AP20648 1035 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 KLRC1P26715 233 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 ERVK-21P61565 698 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 LRCH2Q5VUJ6 765 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 MYOCDQ8IZQ8 938 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 IL27Q8NEV9 243 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 ETNPPLQ8TBG4 499 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 FAM20AQ96MK3 541 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 FTHL17Q9BXU8 183 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 OSBPL7Q9BZF2 842 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 DISC1Q9NRI5 854 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 KCNJ14Q9UNX9 436 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 COL4A6Q14031 1691 aa13.81□□□□□ -0.2
NSMCE1-204ENST00000563273 DOCK5Q9H7D0 1870 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 TRIP12Q14669 1992 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 UNC80Q8N2C7 3258 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 MAGEB2O15479 319 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 ARHGEF15O94989 841 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 TDP2O95551 362 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 C22orf31O95567 290 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 C8orf34Q49A92 452 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 NEK8Q86SG6 692 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 KIAA0319LQ8IZA0 1049 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 NSUN7Q8NE18 718 aaKnown RBP13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 TRAPPC12Q8WVT3 735 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 SAMD11Q96NU1 681 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 TGS1Q96RS0 853 aaKnown RBP13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 CELF4Q9BZC1 486 aaKnown RBP13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 BRMS1Q9HCU9 246 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 LMCD1Q9NZU5 365 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 GABBR1Q9UBS5 961 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 SAMM50Q9Y512 469 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 PRUNE2Q8WUY3 3088 aa13.8□□□□□ -0.2
NSMCE1-204ENST00000563273 TRANK1O15050 2925 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 LCHNA4D1U4 455 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 LINC01553A4QN01 128 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 TBX3O15119 743 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 LARGE1O95461 756 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 INF2Q27J81 1249 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 ODR4Q5SWX8 454 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 TMCO2Q7Z6W1 182 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 CKAP2LQ8IYA6 745 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 NECAB1Q8N987 351 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 FAM49AQ9H0Q0 323 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 UNC45AQ9H3U1 944 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 KCNMB3Q9NPA1 279 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 NRBP2Q9NSY0 501 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 DDX25Q9UHL0 483 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 LIMCH1Q9UPQ0 1083 aa13.79□□□□□ -0.2
NSMCE1-204ENST00000563273 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 ZNF862O60290 1169 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 OATP04181 439 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 IGFBP4P22692 258 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 KRT2P35908 639 aa13.78□□□□□ -0.2
NSMCE1-204ENST00000563273 PPP2R5CQ13362 524 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms