RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 DNAJC6O75061 913 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 ZNF28P17035 718 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 IL13P35225 146 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 SOX5P35711 763 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 NEK4P51957 841 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 JAM2P57087 298 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 PUM1Q14671 1186 aaKnown RBP eCLIP4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 PCBP1Q15365 356 aaKnown RBP eCLIP4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 ARHGAP44Q17R89 818 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 FIGNQ5HY92 759 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 TEPPQ6URK8 271 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 KCTD1Q719H9 257 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 NLGN4XQ8N0W4 816 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 CISD2Q8N5K1 135 aaKnown RBP4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 TTC9BQ8N6N2 239 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 CHST14Q8NCH0 376 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 CHAC2Q8WUX2 184 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 SSBP3Q9BWW4 388 aaPredicted RBP4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 C1QTNF3Q9BXJ4 246 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 HSPBP1Q9NZL4 362 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 B4GALT6Q9UBX8 382 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 SRPK3Q9UPE1 567 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 TELO2Q9Y4R8 837 aa4.6□□□□□ -1.67
SHCBP1-202ENST00000563219 SLC27A2O14975 620 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 KPNA6O60684 536 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 CLASP2O75122 1294 aaKnown RBP4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 CYP7B1O75881 506 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 F2P00734 622 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 LRG1P02750 347 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 DSG1Q02413 1049 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 TUSC3Q13454 348 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 DHCR24Q15392 516 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 SEPT7Q16181 437 aaKnown RBP4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 PRAMEF18Q5VWM3 479 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 CPZQ66K79 652 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 PKN3Q6P5Z2 889 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 FILIP1Q7Z7B0 1213 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 PTRH1Q86Y79 214 aaKnown RBP4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 NOSTRINQ8IVI9 506 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 GPATCH3Q96I76 525 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 CLIC6Q96NY7 704 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 TMPRSS5Q9H3S3 457 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 CABP5Q9NP86 173 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 IFT57Q9NWB7 429 aa4.59□□□□□ -1.67
SHCBP1-202ENST00000563219 ZNF536O15090 1300 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 SLC12A8A0AV02 714 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 B4GALT3O60512 393 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 CYP1A1P04798 512 aaPredicted RBP4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 ZBTB48P10074 688 aaPredicted RBP4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 KRT15P19012 456 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 GJA4P35212 333 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 MLLT6P55198 1093 aaPredicted RBP4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 SURF1Q15526 300 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 ANKRD13AQ8IZ07 590 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 AFAP1L2Q8N4X5 818 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 C2orf69Q8N8R5 385 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 CLEC4DQ8WXI8 215 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 LOXL4Q96JB6 756 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 YTHDC1Q96MU7 727 aaKnown RBP4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 TMEM209Q96SK2 561 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 BOCQ9BWV1 1114 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 KRTAP3-1Q9BYR8 98 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 CD244Q9BZW8 370 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 BRINP2Q9C0B6 783 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 TMEM168Q9H0V1 697 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 L2HGDHQ9H9P8 463 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 WASF3Q9UPY6 502 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 B3GALT1Q9Y5Z6 326 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 ATP23Q9Y6H3 246 aa4.58□□□□□ -1.68
SHCBP1-202ENST00000563219 PTPDC1A2A3K4 754 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 C1QTNF3-AMACRE9PGA6 284 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 LTFP02788 710 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 FAHP16930 419 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 ZNF20P17024 532 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 PTPN1P18031 435 aaKnown RBP4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 POU3F3P20264 500 aaPredicted RBP4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 CREB3L3Q68CJ9 461 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 GLB1LQ6UWU2 654 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 DDX46Q7L014 1031 aaKnown RBP4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 LIMS2Q7Z4I7 341 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 RBM12BQ8IXT5 1001 aaKnown RBP4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 OR2W6PQ8NHA6 318 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 LEO1Q8WVC0 666 aaPredicted RBP4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 DLG3Q92796 817 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 MBD6Q96DN6 1003 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 C8orf49Q96NF6 230 aa4.57□□□□□ -1.68
SHCBP1-202ENST00000563219 FAM90A27PA6NNH2 459 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 ZNF891A8MT65 544 aaPredicted RBP4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 ACOT7O00154 380 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 LAMTOR5O43504 91 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 C4BPAP04003 597 aaKnown RBP4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 BPIP17213 487 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 TNFRSF1AP19438 455 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 SCNN1BP51168 640 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 HERVK_113P62684 666 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 IRF9Q00978 393 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 SEC23AQ15436 765 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 PAN2Q504Q3 1202 aaKnown RBP4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 FSTL4Q6MZW2 842 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms