RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CCDC63Q8NA47 563 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 EXD1Q8NHP7 514 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 TMC2Q8TDI7 906 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 CDKL2Q92772 493 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 SNF8Q96H20 258 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 MED30Q96HR3 178 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 PNKPQ96T60 521 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 KCTD10Q9H3F6 313 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 USP16Q9Y5T5 823 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 CETN3O15182 167 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 KMOO15229 486 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 GALK1P51570 392 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 TAGLNQ01995 201 aaKnown RBP10.16□□□□□ -0.78
CDH1-205ENST00000562836 LSAMPQ13449 338 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 PPP1R7Q15435 360 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 MOGQ16653 247 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 SARM1Q6SZW1 724 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 PNMA8AQ86V59 439 aaPredicted RBP10.16□□□□□ -0.78
CDH1-205ENST00000562836 DDX42Q86XP3 938 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDH1-205ENST00000562836 CARNMT1Q8N4J0 409 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 PSD4Q8NDX1 1056 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 IFT43Q96FT9 208 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 TTC1Q99614 292 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 AIFM2Q9BRQ8 373 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 WDR6Q9NNW5 1121 aaKnown RBP10.16□□□□□ -0.78
CDH1-205ENST00000562836 DDX18Q9NVP1 670 aaKnown RBP10.16□□□□□ -0.78
CDH1-205ENST00000562836 THAP1Q9NVV9 213 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 TROQ12816 1431 aaPredicted RBP10.16□□□□□ -0.78
CDH1-205ENST00000562836 ANKRD50Q9ULJ7 1429 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 RAPGEF6Q8TEU7 1601 aa10.16□□□□□ -0.78
CDH1-205ENST00000562836 SNTNA6NMZ2 147 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 FANCGO15287 622 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 NAGAP17050 411 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 IFNA8P32881 189 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 SERPINB4P48594 390 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 KPNA1P52294 538 aaPredicted RBP10.15□□□□□ -0.78
CDH1-205ENST00000562836 LRRC74AQ0VAA2 488 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 HSPA14Q0VDF9 509 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 STK38Q15208 465 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 MAJINQ3KP22 176 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 ODR4Q5SWX8 454 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 NAA35Q5VZE5 725 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 PHLDB2Q86SQ0 1253 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 TUBGCP5Q96RT8 1024 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 ADNPQ9H2P0 1102 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 VCXQ9H320 206 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 SMARCAD1Q9H4L7 1026 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 WASH6PQ9NQA3 447 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 GGA2Q9UJY4 613 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 TACC3Q9Y6A5 838 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 KIAA0586Q9BVV6 1533 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 KANSL1LA0AUZ9 987 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 CCDC162PA2VCL2 907 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 OR5K4A6NMS3 321 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 FBP2O00757 339 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 POU2F1P14859 743 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 SCTRP47872 440 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 RFTN1Q14699 578 aaPredicted RBP10.15□□□□□ -0.78
CDH1-205ENST00000562836 SF3B3Q15393 1217 aaKnown RBP10.15□□□□□ -0.78
CDH1-205ENST00000562836 SF3B4Q15427 424 aaKnown RBP eCLIP10.15□□□□□ -0.78
CDH1-205ENST00000562836 STILQ15468 1287 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 EZH2Q15910 746 aaKnown RBP10.15□□□□□ -0.78
CDH1-205ENST00000562836 CNPY1Q3B7I2 92 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 MFSD6Q6ZSS7 791 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 CPLX4Q7Z7G2 160 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 BTBD6Q96KE9 485 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 BPIFA3Q9BQP9 254 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 NIFKQ9BYG3 293 aaKnown RBP10.15□□□□□ -0.78
CDH1-205ENST00000562836 ANKZF1Q9H8Y5 726 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 RBMX2Q9Y388 322 aaKnown RBP10.15□□□□□ -0.78
CDH1-205ENST00000562836 RWDD3Q9Y3V2 267 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 KIAA0556O60303 1618 aa10.15□□□□□ -0.78
CDH1-205ENST00000562836 CEP170Q5SW79 1584 aa10.15□□□□□ -0.79
CDH1-205ENST00000562836 ZSCAN5BA6NJL1 495 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 INO80B-WBP1J3KQ70 363 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 SEMA3AQ14563 771 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 EAPPQ56P03 285 aaPredicted RBP10.14□□□□□ -0.79
CDH1-205ENST00000562836 ANKRD36BP1Q96IX9 119 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 COG8Q96MW5 612 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 KLHL4Q9C0H6 718 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 CCDC87Q9NVE4 849 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 PANK4Q9NVE7 773 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 CRNNQ9UBG3 495 aaPredicted RBP10.14□□□□□ -0.79
CDH1-205ENST00000562836 SLC4A7Q9Y6M7 1214 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 GPATCH8Q9UKJ3 1502 aaKnown RBP10.14□□□□□ -0.79
CDH1-205ENST00000562836 ADCY10Q96PN6 1610 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 L1CAMP32004 1257 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 KRT9P35527 623 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 NUBP1P53384 320 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 PDCLQ13371 301 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 ANKRD20A8PQ5CZ79 823 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 FAM26DQ5JW98 314 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 DHX32Q7L7V1 743 aaKnown RBP10.14□□□□□ -0.79
CDH1-205ENST00000562836 CCDC25Q86WR0 208 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 CEP70Q8NHQ1 597 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 PIP4K2CQ8TBX8 421 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 PGBD4Q96DM1 585 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 NLRP3Q96P20 1036 aa10.14□□□□□ -0.79
CDH1-205ENST00000562836 SERINC2Q96SA4 455 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms