RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 CTCFLQ8NI51 663 aaPredicted RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 PAWRQ96IZ0 340 aaKnown RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 TMEM87BQ96K49 555 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 FAM13BQ9NYF5 915 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 DMGDHQ9UI17 866 aaKnown RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 ZHX1Q9UKY1 873 aaPredicted RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 LRFN2Q9ULH4 789 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 DIS3Q9Y2L1 958 aaKnown RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 SLC12A7Q9Y666 1083 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 DNMT3AQ9Y6K1 912 aaPredicted RBP6.72□□□□□ -1.33
CDH13-206ENST00000562601 PDE4DIPQ5VU43 2346 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 ASTN1O14525 1302 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 PFASO15067 1338 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 ALPK3Q96L96 1907 aa6.72□□□□□ -1.33
CDH13-206ENST00000562601 KLF18A0A0U1RQI7 1052 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 ZBTB5O15062 677 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 SIN3BO75182 1162 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 DDAH1O94760 285 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 CFBP00751 764 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 ZNF865P0CJ78 1059 aaPredicted RBP6.71□□□□□ -1.34
CDH13-206ENST00000562601 RPS6KB1P23443 525 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 LIFRP42702 1097 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 RPS6P62753 249 aaKnown RBP6.71□□□□□ -1.34
CDH13-206ENST00000562601 ACVR2BQ13705 512 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 TMEM63BQ5T3F8 832 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 GJC2Q5T442 439 aaPredicted RBP6.71□□□□□ -1.34
CDH13-206ENST00000562601 BLOC1S2Q6QNY1 142 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 SYNE3Q6ZMZ3 975 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 SYT9Q86SS6 491 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 TMTC2Q8N394 836 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 FANCBQ8NB91 859 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 EDARADDQ8WWZ3 215 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 DPF3Q92784 378 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 BRF1Q92994 677 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 PNMA5Q96PV4 448 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 TAAR1Q96RJ0 339 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 UPF3BQ9BZI7 483 aaKnown RBP6.71□□□□□ -1.34
CDH13-206ENST00000562601 RIOX1Q9H6W3 641 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 PDGFCQ9NRA1 345 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 DDX20Q9UHI6 824 aaKnown RBP6.71□□□□□ -1.34
CDH13-206ENST00000562601 OGDHLQ9ULD0 1010 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 CNPY2Q9Y2B0 182 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 PCDHA1Q9Y5I3 950 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 ABCB11O95342 1321 aa6.71□□□□□ -1.34
CDH13-206ENST00000562601 LRRC37A2A6NM11 1700 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 PNMA6FA0A0J9YX94 578 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 ASB14A6NK59 587 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 GOLGA8AA7E2F4 631 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 GOLGA8BA8MQT2 603 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 OPLAHO14841 1288 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 SEPT4O43236 478 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 ZBTB43O43298 467 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 ADCY6O43306 1168 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 PGK1P00558 417 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 HMGB1P09429 215 aaKnown RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 CALM1P0DP23 149 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 CALM2P0DP24 149 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 CALM3P0DP25 149 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 EPXP11678 715 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 PSMA5P28066 241 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 HOXA13P31271 388 aaPredicted RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 KIF5BP33176 963 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 ALDH5A1P51649 535 aaPredicted RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 NAA30Q147X3 362 aaPredicted RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 CCDC144BQ3MJ40 725 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 APOA5Q6Q788 366 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 MAMDC4Q6UXC1 1216 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 NOL8Q76FK4 1167 aaKnown RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 RUFY3Q7L099 469 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 UBE2Q1Q7Z7E8 422 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 SGMS1Q86VZ5 419 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 TREML1Q86YW5 311 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 FBXO16Q8IX29 292 aaPredicted RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 FERMT2Q96AC1 680 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 MTMR8Q96EF0 704 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 RRP36Q96EU6 259 aaKnown RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 SCARF2Q96GP6 870 aaPredicted RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 MAP3K14Q99558 947 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 MTA3Q9BTC8 594 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 AMNQ9BXJ7 453 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 C11orf49Q9H6J7 331 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 COL20A1Q9P218 1284 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 STIM2Q9P246 746 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 HCN2Q9UL51 889 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 MRPL11Q9Y3B7 192 aaKnown RBP6.7□□□□□ -1.34
CDH13-206ENST00000562601 WDR19Q8NEZ3 1342 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 SYNGAP1Q96PV0 1343 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 MYH7BA7E2Y1 1941 aa6.7□□□□□ -1.34
CDH13-206ENST00000562601 CEP290O15078 2479 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 MYADML2A6NDP7 307 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 PIK3R2O00459 728 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 DTNBO60941 627 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 RARBP10826 455 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 EIF2AK2P19525 551 aaKnown RBP6.69□□□□□ -1.34
CDH13-206ENST00000562601 ALAS2P22557 587 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 AMPD1P23109 780 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 CDC27P30260 824 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 ADCYAP1R1P41586 468 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 METAP2P50579 478 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms