RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 NEMFO60524 1076 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 CAND2O75155 1236 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 IQCF3P0C7M6 154 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 CKBP12277 381 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 ATP2B1P20020 1258 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 PDCP20941 246 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 ADAM17P78536 824 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 PPP2R5CQ13362 524 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 CALCRLQ16602 461 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 MCTP1Q6DN14 999 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 LRRC8DQ7L1W4 858 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 RSPH3Q86UC2 560 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 POTEDQ86YR6 584 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 BBXQ8WY36 941 aaPredicted RBP18.48■□□□□ 0.55
PKD1-226ENST00000562425 DHX38Q92620 1227 aaKnown RBP18.48■□□□□ 0.55
PKD1-226ENST00000562425 GJA10Q969M2 543 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 INTS4Q96HW7 963 aaKnown RBP18.48■□□□□ 0.55
PKD1-226ENST00000562425 SCLYQ96I15 445 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 FAM167AQ96KS9 214 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 RNPC3Q96LT9 517 aaKnown RBP18.48■□□□□ 0.55
PKD1-226ENST00000562425 NRBP2Q9NSY0 501 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 TUBE1Q9UJT0 475 aa18.48■□□□□ 0.55
PKD1-226ENST00000562425 DKC1O60832 514 aaKnown RBP eCLIP18.47■□□□□ 0.55
PKD1-226ENST00000562425 FGBP02675 491 aa18.47■□□□□ 0.55
PKD1-226ENST00000562425 THPOP40225 353 aa18.47■□□□□ 0.55
PKD1-226ENST00000562425 EPHB4P54760 987 aa18.47■□□□□ 0.55
PKD1-226ENST00000562425 IGBP1P78318 339 aa18.47■□□□□ 0.55
PKD1-226ENST00000562425 TRIM71Q2Q1W2 868 aaKnown RBP18.47■□□□□ 0.55
PKD1-226ENST00000562425 ZNF484Q5JVG2 852 aa18.47■□□□□ 0.55
PKD1-226ENST00000562425 B3GNT9Q6UX72 402 aa18.47■□□□□ 0.55
PKD1-226ENST00000562425 HAS1Q92839 578 aa18.47■□□□□ 0.55
PKD1-226ENST00000562425 MTIF3Q9H2K0 278 aaKnown RBP18.47■□□□□ 0.55
PKD1-226ENST00000562425 TTYH1Q9H313 450 aaPredicted RBP18.47■□□□□ 0.55
PKD1-226ENST00000562425 PCDHA12Q9UN75 941 aa18.47■□□□□ 0.55
PKD1-226ENST00000562425 CEP131Q9UPN4 1083 aa18.47■□□□□ 0.55
PKD1-226ENST00000562425 COL1A2P08123 1366 aa18.46■□□□□ 0.55
PKD1-226ENST00000562425 MBLAC1A4D2B0 266 aaPredicted RBP18.46■□□□□ 0.55
PKD1-226ENST00000562425 MCM7P33993 719 aa18.46■□□□□ 0.55
PKD1-226ENST00000562425 HSCBQ8IWL3 235 aa18.46■□□□□ 0.55
PKD1-226ENST00000562425 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.46■□□□□ 0.552e-6■■■■□ 20.3
PKD1-226ENST00000562425 VAV3Q9UKW4 847 aa18.46■□□□□ 0.55
PKD1-226ENST00000562425 IGSF9BQ9UPX0 1349 aa18.46■□□□□ 0.55
PKD1-226ENST00000562425 RSPH10B2B2RC85 870 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 KIF28PB7ZC32 967 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 RSPH10BP0C881 870 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 ACRP10323 421 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 ACTN1P12814 892 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 FOSL2P15408 326 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 TTC38Q5R3I4 469 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 TMEM240Q5SV17 173 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 MARCH8Q5T0T0 291 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 ZNF618Q5T7W0 954 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 ZNF365Q70YC5 407 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 RPAINQ86UA6 219 aa18.45■□□□□ 0.54
PKD1-226ENST00000562425 FTOQ9C0B1 505 aaKnown RBP eCLIP18.45■□□□□ 0.54
PKD1-226ENST00000562425 OATP04181 439 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 ATP4AP20648 1035 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 TXKP42681 527 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 PSMC5P62195 406 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 EPHA7Q15375 998 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 ZNF174Q15697 407 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 TRMT1LQ7Z2T5 733 aaKnown RBP18.44■□□□□ 0.54
PKD1-226ENST00000562425 DEFB128Q7Z7B8 93 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 MYLIPQ8WY64 445 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 WNT8BQ93098 351 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 TTC12Q9H892 705 aaPredicted RBP18.44■□□□□ 0.54
PKD1-226ENST00000562425 PCDHA2Q9Y5H9 948 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 KAT6AQ92794 2004 aa18.44■□□□□ 0.54
PKD1-226ENST00000562425 MYO9BQ13459 2157 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 P4HBP07237 508 aaKnown RBP18.43■□□□□ 0.54
PKD1-226ENST00000562425 KLRC1P26715 233 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 QARSP47897 775 aaKnown RBP18.43■□□□□ 0.54
PKD1-226ENST00000562425 PRKCEQ02156 737 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 RILPL1Q5EBL4 403 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 XKR3Q5GH77 459 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 NCAPH2Q6IBW4 605 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 MTHFD1LQ6UB35 978 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 NME8Q8N427 588 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 TRAPPC12Q8WVT3 735 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 HERVK_113Q902F9 699 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 SYMPKQ92797 1274 aaKnown RBP18.43■□□□□ 0.54
PKD1-226ENST00000562425 MTMR9Q96QG7 549 aa18.43■□□□□ 0.54
PKD1-226ENST00000562425 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.42■□□□□ 0.54
PKD1-226ENST00000562425 SMIM35A0A1B0GVV1 85 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.42■□□□□ 0.54
PKD1-226ENST00000562425 EML1O00423 815 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 WNT7AO00755 349 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 MAGEB2O15479 319 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 ZNF862O60290 1169 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 HSP90AA1P07900 732 aaKnown RBP18.42■□□□□ 0.54
PKD1-226ENST00000562425 OR52Z1P0C646 297 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 FAM26DQ5JW98 314 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 IER5Q5VY09 327 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 RUFY4Q6ZNE9 571 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 DNAJB3Q8WWF6 145 aa18.42■□□□□ 0.54
PKD1-226ENST00000562425 TRIP12Q14669 1992 aaPredicted RBP18.41■□□□□ 0.54
PKD1-226ENST00000562425 M0QZ92 97 aa18.41■□□□□ 0.54
PKD1-226ENST00000562425 SPIRE1Q08AE8 756 aa18.41■□□□□ 0.54
PKD1-226ENST00000562425 UGCGQ16739 394 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms