RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 DRP2Q13474 957 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 PLCB4Q15147 1175 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 QPCTQ16769 361 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 EDRF1Q3B7T1 1238 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 H2AFVQ71UI9 128 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 ADGRF4Q8IZF3 695 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 MAGOHBQ96A72 148 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 TRIM31Q9BZY9 425 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 JMJD4Q9H9V9 463 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 SLC40A1Q9NP59 571 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 MTMR4Q9NYA4 1195 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 MYH4Q9Y623 1939 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 GPR75-ASB3A0A0A6YYF3 556 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 CHUKO15111 745 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 ATP2C2O75185 946 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 XRCC5P13010 732 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 NFIXQ14938 502 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 AGBL2Q5U5Z8 902 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 CELF4Q9BZC1 486 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 ACTR5Q9H9F9 607 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 CNOT8Q9UFF9 292 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 UTP11Q9Y3A2 253 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 ROBO1Q9Y6N7 1651 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 GCFC2P16383 781 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 PON1P27169 355 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 SLC16A2P36021 539 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 CASP5P51878 434 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 HYIQ5T013 277 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 CPLX4Q7Z7G2 160 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 CACNA2D3Q8IZS8 1091 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 U2AF1L4Q8WU68 220 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 SEC16BQ96JE7 1060 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 PSTPIP2Q9H939 334 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 NARFQ9UHQ1 456 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 SPATA31A1Q5TZJ5 1347 aa15.24■□□□□ 0.03
VPS9D1-202ENST00000561976 PPP1R11O60927 126 aaPredicted RBP15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 STAT3P40763 770 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 PICALMQ13492 652 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 TTBK2Q6IQ55 1244 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 FRMD5Q7Z6J6 570 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 DHX37Q8IY37 1157 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 RBM46Q8TBY0 533 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 RAPGEF5Q92565 580 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 SLITRK6Q9H5Y7 841 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 POTEFA5A3E0 1075 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 DCDC2CA8MYV0 355 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 POTEIP0CG38 1075 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 PPP1R18Q6NYC8 613 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 POTEGQ6S5H5 508 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 POTEEQ6S8J3 1075 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 DPP8Q6V1X1 898 aaPredicted RBP15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 TMC3Q7Z5M5 1100 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 SYCE1Q8N0S2 351 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 C3orf20Q8ND61 904 aa15.23■□□□□ 0.03
VPS9D1-202ENST00000561976 PRPF4BQ13523 1007 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 CXorf56Q9H5V9 222 aa15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 SUCLA2Q9P2R7 463 aaPredicted RBP15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 ATP8A1Q9Y2Q0 1164 aa15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 DDX60LQ5H9U9 1706 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 MED24O75448 989 aa15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 RASSF9O75901 435 aa15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 AKR1B1P15121 316 aa15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 CLK2P49760 499 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 KNOP1Q1ED39 458 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 ARSHQ5FYA8 562 aa15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 ZC3H3Q8IXZ2 948 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 ZKSCAN4Q969J2 545 aaPredicted RBP15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 OSBPL7Q9BZF2 842 aa15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 DHX36Q9H2U1 1008 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 FAM114A2Q9NRY5 505 aa15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 AMFRQ9UKV5 643 aa15.22■□□□□ 0.03
VPS9D1-202ENST00000561976 FAM170AA1A519 330 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 PHF20L1A8MW92 1017 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L15C9J2P7 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L13C9JLJ4 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L11C9JVI0 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L18D6R9N7 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L22D6RA61 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L17D6RBQ6 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L19D6RCP7 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L20D6RJB6 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 MEIS1O00470 390 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 RAD21O60216 631 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 FGGP02679 453 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 IBSPP21815 317 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 RHBDL3P58872 404 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 ZNF543Q08ER8 600 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L24Q0WX57 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 GKAP1Q5VSY0 366 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 GJB7Q6PEY0 223 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L6PQ6QN14 398 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 SFR1Q86XK3 245 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 PSMD1Q99460 953 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 TRIM51Q9BSJ1 452 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 GOPCQ9HD26 462 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 THRAP3Q9Y2W1 955 aaKnown RBP15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 USP17L10C9JJH3 530 aa15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 CALUO43852 315 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-202ENST00000561976 GFPT2O94808 682 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms