RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 VPS54Q9P1Q0 977 aa9.4□□□□□ -0.9
GINS3-204ENST00000561952 FAM86B1E9PN63 330 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 hCG_1984214I3L0E3 225 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 DTNBO60941 627 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 FOSP01100 380 aaPredicted RBP9.39□□□□□ -0.91
GINS3-204ENST00000561952 CHRNA1P02708 482 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 FAM86B2P0C5J1 330 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 INSRRP14616 1297 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 PSMA5P28066 241 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 CLK2P49760 499 aaKnown RBP9.39□□□□□ -0.91
GINS3-204ENST00000561952 KCNQ1P51787 676 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 ADAM17P78536 824 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 MRPS5P82675 430 aaKnown RBP9.39□□□□□ -0.91
GINS3-204ENST00000561952 PLCB4Q15147 1175 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 RSPH3Q86UC2 560 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 REXO1Q8N1G1 1221 aaKnown RBP9.39□□□□□ -0.91
GINS3-204ENST00000561952 ZNF713Q8N859 430 aaPredicted RBP9.39□□□□□ -0.91
GINS3-204ENST00000561952 SYMPKQ92797 1274 aaKnown RBP9.39□□□□□ -0.91
GINS3-204ENST00000561952 KCNB2Q92953 911 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 NECAB3Q96P71 396 aaPredicted RBP9.39□□□□□ -0.91
GINS3-204ENST00000561952 TGS1Q96RS0 853 aaKnown RBP9.39□□□□□ -0.91
GINS3-204ENST00000561952 PPP1R16BQ96T49 567 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 UPF3BQ9BZI7 483 aaKnown RBP9.39□□□□□ -0.91
GINS3-204ENST00000561952 C6orf50Q9HD87 102 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 TCEAL9Q9UHQ7 104 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 GINS2Q9Y248 185 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 CDY2AQ9Y6F7 541 aa9.39□□□□□ -0.91
GINS3-204ENST00000561952 KIAA1671Q9BY89 1806 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 NFASCO94856 1347 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.38□□□□□ -0.91
GINS3-204ENST00000561952 MAFGO15525 162 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 LPXNO60711 386 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 CAND2O75155 1236 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 CCNE2O96020 404 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 PSEN1P49768 467 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 STAT5BP51692 787 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 RCAN1P53805 252 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 MRPS6P82932 125 aaKnown RBP9.38□□□□□ -0.91
GINS3-204ENST00000561952 MGAT3Q09327 533 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 LPIN1Q14693 890 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 PKN1Q16512 942 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 MARCH8Q5T0T0 291 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 TAF2Q6P1X5 1199 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 CKAP2LQ8IYA6 745 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 FBXO22Q8NEZ5 403 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 ADAMTS19Q8TE59 1207 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 CCDC12Q8WUD4 166 aaPredicted RBP9.38□□□□□ -0.91
GINS3-204ENST00000561952 ATXN2LQ8WWM7 1075 aaKnown RBP9.38□□□□□ -0.91
GINS3-204ENST00000561952 ASB2Q96Q27 587 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 ZNF577Q9BSK1 485 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 GLT8D2Q9H1C3 349 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 SUGCTQ9HAC7 445 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 INSL6Q9Y581 213 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 ATG2AQ2TAZ0 1938 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 RALGAPA2Q2PPJ7 1873 aa9.38□□□□□ -0.91
GINS3-204ENST00000561952 NID2Q14112 1375 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 TTC28Q96AY4 2481 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 M0QZ92 97 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 IPO5O00410 1097 aaKnown RBP9.37□□□□□ -0.91
GINS3-204ENST00000561952 MEIS1O00470 390 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 PRPF3O43395 683 aaKnown RBP9.37□□□□□ -0.91
GINS3-204ENST00000561952 CHMP2AO43633 222 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 PDIA3P30101 505 aaKnown RBP9.37□□□□□ -0.91
GINS3-204ENST00000561952 CD52P31358 61 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 ERVK-21P61565 698 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 TOB2Q14106 344 aaPredicted RBP9.37□□□□□ -0.91
GINS3-204ENST00000561952 TMEM266Q2M3C6 531 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 PRR16Q569H4 304 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 FAM26DQ5JW98 314 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 FAM160B1Q5W0V3 765 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 PDXDC2PQ6P474 469 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 RUFY3Q7L099 469 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 CCDC60Q8IWA6 550 aaPredicted RBP9.37□□□□□ -0.91
GINS3-204ENST00000561952 CCDC148Q8NFR7 591 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 APBB2Q92870 758 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 UHRF1Q96T88 793 aaPredicted RBP9.37□□□□□ -0.91
GINS3-204ENST00000561952 ZMYND12Q9H0C1 365 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 ZNF302Q9NR11 478 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 SAMM50Q9Y512 469 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 TRPV2Q9Y5S1 764 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 CYP46A1Q9Y6A2 500 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 BRWD1Q9NSI6 2320 aa9.37□□□□□ -0.91
GINS3-204ENST00000561952 IGLV3-22A0A075B6J6 115 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 ESYT2A0FGR8 921 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 MBLAC1A4D2B0 266 aaPredicted RBP9.36□□□□□ -0.91
GINS3-204ENST00000561952 RRN3P2A6NIE6 340 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 CPLX1O14810 134 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 GNA11P29992 359 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 CTNNB1P35222 781 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 NLRP5P59047 1200 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 SETQ01105 290 aaPredicted RBP9.36□□□□□ -0.91
GINS3-204ENST00000561952 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
GINS3-204ENST00000561952 NTRK3Q16288 839 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 EPC2Q52LR7 807 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 FBXO47Q5MNV8 452 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 SWSAP1Q6NVH7 229 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 MIS18BP1Q6P0N0 1132 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 MTHFD1LQ6UB35 978 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 TSHZ1Q6ZSZ6 1077 aa9.36□□□□□ -0.91
GINS3-204ENST00000561952 EP400NLQ6ZTU2 488 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms