RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 ALADP13716 330 aa28.79■■■□□ 2.2
NME3-202ENST00000561637 HTRA4P83105 476 aaPredicted RBP28.79■■■□□ 2.2
NME3-202ENST00000561637 STK3Q13188 491 aa28.79■■■□□ 2.2
NME3-202ENST00000561637 PLA2G4DQ86XP0 818 aa28.79■■■□□ 2.2
NME3-202ENST00000561637 REXO1Q8N1G1 1221 aaKnown RBP28.79■■■□□ 2.2
NME3-202ENST00000561637 MRPL38Q96DV4 380 aaKnown RBP28.79■■■□□ 2.2
NME3-202ENST00000561637 RNF26Q9BY78 433 aaPredicted RBP28.79■■■□□ 2.2
NME3-202ENST00000561637 GLT8D2Q9H1C3 349 aa28.79■■■□□ 2.2
NME3-202ENST00000561637 C6orf50Q9HD87 102 aa28.79■■■□□ 2.2
NME3-202ENST00000561637 EPB41L2O43491 1005 aaKnown RBP28.78■■■□□ 2.2
NME3-202ENST00000561637 EDIL3O43854 480 aa28.78■■■□□ 2.2
NME3-202ENST00000561637 MRE11P49959 708 aa28.78■■■□□ 2.2
NME3-202ENST00000561637 PLCB4Q15147 1175 aa28.78■■■□□ 2.2
NME3-202ENST00000561637 TEX2Q8IWB9 1127 aa28.78■■■□□ 2.2
NME3-202ENST00000561637 MYOCDQ8IZQ8 938 aa28.78■■■□□ 2.2
NME3-202ENST00000561637 SP7Q8TDD2 431 aaPredicted RBP28.78■■■□□ 2.2
NME3-202ENST00000561637 DHX15O43143 795 aaKnown RBP28.77■■■□□ 2.2
NME3-202ENST00000561637 INSRRP14616 1297 aa28.77■■■□□ 2.2
NME3-202ENST00000561637 AKAP17AQ02040 695 aaKnown RBP28.77■■■□□ 2.2
NME3-202ENST00000561637 EPC2Q52LR7 807 aa28.77■■■□□ 2.2
NME3-202ENST00000561637 AIFM3Q96NN9 605 aa28.77■■■□□ 2.2
NME3-202ENST00000561637 TM6SF1Q9BZW5 370 aa28.77■■■□□ 2.2
NME3-202ENST00000561637 TUBE1Q9UJT0 475 aa28.77■■■□□ 2.2
NME3-202ENST00000561637 TRIOO75962 3097 aa28.77■■■□□ 2.2
NME3-202ENST00000561637 MBLAC1A4D2B0 266 aaPredicted RBP28.76■■■□□ 2.19
NME3-202ENST00000561637 CYP3A4P08684 503 aa28.76■■■□□ 2.19
NME3-202ENST00000561637 FAM26DQ5JW98 314 aa28.76■■■□□ 2.19
NME3-202ENST00000561637 DNAJB3Q8WWF6 145 aa28.76■■■□□ 2.19
NME3-202ENST00000561637 PDRG1Q9NUG6 133 aa28.76■■■□□ 2.19
NME3-202ENST00000561637 POTEB3A0JP26 581 aa28.75■■■□□ 2.19
NME3-202ENST00000561637 CAND2O75155 1236 aa28.75■■■□□ 2.19
NME3-202ENST00000561637 GHRP10912 638 aa28.75■■■□□ 2.19
NME3-202ENST00000561637 MGAT3Q09327 533 aa28.75■■■□□ 2.19
NME3-202ENST00000561637 CSPP1Q1MSJ5 1256 aa28.75■■■□□ 2.19
NME3-202ENST00000561637 POTEBQ6S5H4 581 aa28.75■■■□□ 2.19
NME3-202ENST00000561637 NIPA1Q7RTP0 329 aa28.75■■■□□ 2.19
NME3-202ENST00000561637 CCDC12Q8WUD4 166 aaPredicted RBP28.75■■■□□ 2.19
NME3-202ENST00000561637 FAM49AQ9H0Q0 323 aaPredicted RBP28.75■■■□□ 2.19
NME3-202ENST00000561637 TRPC6Q9Y210 931 aa28.75■■■□□ 2.19
NME3-202ENST00000561637 RALGAPA2Q2PPJ7 1873 aa28.74■■■□□ 2.19
NME3-202ENST00000561637 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.74■■■□□ 2.19
NME3-202ENST00000561637 DCXO43602 365 aa28.74■■■□□ 2.19
NME3-202ENST00000561637 ATG7O95352 703 aa28.74■■■□□ 2.19
NME3-202ENST00000561637 AMHP03971 560 aa28.74■■■□□ 2.19
NME3-202ENST00000561637 NHLH1Q02575 133 aa28.74■■■□□ 2.19
NME3-202ENST00000561637 PUS10Q3MIT2 529 aaKnown RBP28.74■■■□□ 2.19
NME3-202ENST00000561637 CCDC60Q8IWA6 550 aaPredicted RBP28.74■■■□□ 2.19
NME3-202ENST00000561637 SEPT8Q92599 483 aa28.74■■■□□ 2.19
NME3-202ENST00000561637 FBXL18Q96ME1 805 aa28.74■■■□□ 2.19
NME3-202ENST00000561637 AZI2Q9H6S1 392 aa28.74■■■□□ 2.19
NME3-202ENST00000561637 ZNF318Q5VUA4 2279 aa28.74■■■□□ 2.19
NME3-202ENST00000561637 STAT5BP51692 787 aa28.73■■■□□ 2.19
NME3-202ENST00000561637 TCEAL5Q5H9L2 206 aa28.73■■■□□ 2.19
NME3-202ENST00000561637 ABHD15Q6UXT9 468 aa28.73■■■□□ 2.19
NME3-202ENST00000561637 BANK1Q8NDB2 785 aa28.73■■■□□ 2.19
NME3-202ENST00000561637 LENG9Q96B70 501 aa28.73■■■□□ 2.19
NME3-202ENST00000561637 H3BNC9 293 aa28.72■■■□□ 2.19
NME3-202ENST00000561637 IPO5O00410 1097 aaKnown RBP28.72■■■□□ 2.19
NME3-202ENST00000561637 ZP2Q05996 745 aa28.72■■■□□ 2.19
NME3-202ENST00000561637 GPM6BQ13491 265 aa28.72■■■□□ 2.19
NME3-202ENST00000561637 LPIN1Q14693 890 aa28.72■■■□□ 2.19
NME3-202ENST00000561637 PTPROQ16827 1216 aa28.72■■■□□ 2.19
NME3-202ENST00000561637 PRR16Q569H4 304 aa28.72■■■□□ 2.19
NME3-202ENST00000561637 TAF2Q6P1X5 1199 aa28.72■■■□□ 2.19
NME3-202ENST00000561637 EP400NLQ6ZTU2 488 aa28.72■■■□□ 2.19
NME3-202ENST00000561637 PABPC5Q96DU9 382 aaKnown RBP28.72■■■□□ 2.19
NME3-202ENST00000561637 ZNF274Q96GC6 653 aaPredicted RBP28.72■■■□□ 2.19
NME3-202ENST00000561637 CDY2AQ9Y6F7 541 aa28.72■■■□□ 2.19
NME3-202ENST00000561637 IGKV6D-21A0A0A0MT36 114 aa28.71■■■□□ 2.19
NME3-202ENST00000561637 GNA11P29992 359 aa28.71■■■□□ 2.19
NME3-202ENST00000561637 SSRP1Q08945 709 aaKnown RBP28.71■■■□□ 2.19
NME3-202ENST00000561637 TMEM62Q0P6H9 643 aa28.71■■■□□ 2.19
NME3-202ENST00000561637 TIGD5Q53EQ6 642 aa28.71■■■□□ 2.19
NME3-202ENST00000561637 PLPPR4Q7Z2D5 763 aa28.71■■■□□ 2.19
NME3-202ENST00000561637 RPAINQ86UA6 219 aa28.71■■■□□ 2.19
NME3-202ENST00000561637 CCDC148Q8NFR7 591 aa28.71■■■□□ 2.19
NME3-202ENST00000561637 GJA10Q969M2 543 aa28.71■■■□□ 2.19
NME3-202ENST00000561637 ZNF577Q9BSK1 485 aa28.71■■■□□ 2.19
NME3-202ENST00000561637 IFIH1Q9BYX4 1025 aaKnown RBP28.71■■■□□ 2.19
NME3-202ENST00000561637 BACH1O14867 736 aa28.7■■■□□ 2.18
NME3-202ENST00000561637 ATP4AP20648 1035 aa28.7■■■□□ 2.18
NME3-202ENST00000561637 NLRP5P59047 1200 aa28.7■■■□□ 2.18
NME3-202ENST00000561637 COL19A1Q14993 1142 aa28.7■■■□□ 2.18
NME3-202ENST00000561637 NPY5RQ15761 445 aa28.7■■■□□ 2.18
NME3-202ENST00000561637 TPCN1Q9ULQ1 816 aa28.7■■■□□ 2.18
NME3-202ENST00000561637 C19orf67A6NJJ6 358 aa28.69■■■□□ 2.18
NME3-202ENST00000561637 UPP2O95045 317 aa28.69■■■□□ 2.18
NME3-202ENST00000561637 CIITAP33076 1130 aa28.69■■■□□ 2.18
NME3-202ENST00000561637 SCRN1Q12765 414 aa28.69■■■□□ 2.18
NME3-202ENST00000561637 TMEM192Q8IY95 271 aa28.69■■■□□ 2.18
NME3-202ENST00000561637 TOP1MTQ969P6 601 aa28.69■■■□□ 2.18
NME3-202ENST00000561637 SAMD11Q96NU1 681 aa28.69■■■□□ 2.18
NME3-202ENST00000561637 AGO3Q9H9G7 860 aaKnown RBP28.69■■■□□ 2.18
NME3-202ENST00000561637 RRN3P2A6NIE6 340 aa28.68■■■□□ 2.18
NME3-202ENST00000561637 CPLX1O14810 134 aa28.68■■■□□ 2.18
NME3-202ENST00000561637 MRPS6P82932 125 aaKnown RBP28.68■■■□□ 2.18
NME3-202ENST00000561637 FBXO47Q5MNV8 452 aa28.68■■■□□ 2.18
NME3-202ENST00000561637 ERICH6BQ5W0A0 696 aa28.68■■■□□ 2.18
NME3-202ENST00000561637 SWSAP1Q6NVH7 229 aa28.68■■■□□ 2.18
NME3-202ENST00000561637 TRIM22Q8IYM9 498 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms