RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 XPNPEP3Q9NQH7 507 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 SAMM50Q9Y512 469 aa13.03□□□□□ -0.32
HERC1-214ENST00000561400 A6NJR5 290 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 WDR64B1ANS9 1081 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 NOP56O00567 594 aaKnown RBP13.02□□□□□ -0.33
HERC1-214ENST00000561400 ADAMTS4O75173 837 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 TCF7P36402 384 aaPredicted RBP13.02□□□□□ -0.33
HERC1-214ENST00000561400 BEX3Q00994 111 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 SWT1Q5T5J6 900 aaKnown RBP13.02□□□□□ -0.33
HERC1-214ENST00000561400 ADALQ6DHV7 355 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 TMEM87AQ8NBN3 555 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 SEPT1Q8WYJ6 367 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 RAB34Q9BZG1 259 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 AP5M1Q9H0R1 490 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 RNF208Q9H0X6 261 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 UPF3AQ9H1J1 476 aaKnown RBP13.02□□□□□ -0.33
HERC1-214ENST00000561400 RGL1Q9NZL6 768 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 TCEAL9Q9UHQ7 104 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 PCDHA10Q9Y5I2 948 aa13.02□□□□□ -0.33
HERC1-214ENST00000561400 MSCO60682 206 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 COQ9O75208 318 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 GADD45BO75293 160 aaPredicted RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 MMP3P08254 477 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 C6orf222P0C671 652 aaPredicted RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 SFNP31947 248 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 JAK3P52333 1124 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 BIRC2Q13490 618 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 EPHA7Q15375 998 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 CCDC60Q8IWA6 550 aaPredicted RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 AK8Q96MA6 479 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 PCYT2Q99447 389 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 HSD17B14Q9BPX1 270 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 PAIP2Q9BPZ3 127 aaKnown RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 EIF2AK1Q9BQI3 630 aaKnown RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 RPS6KL1Q9Y6S9 549 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 IGKV6D-21A0A0A0MT36 114 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 PRPF40AO75400 957 aaKnown RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 SUPT20HL2P0C7V6 817 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 SPATA31C1P0DKV0 1188 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 HOXD8P13378 290 aaPredicted RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 NKX3-2P78367 333 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 CYP4A11Q02928 519 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 FSCN1Q16658 493 aaKnown RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 UGCGQ16739 394 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 SWSAP1Q6NVH7 229 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 RDM1Q8NG50 284 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 SYMPKQ92797 1274 aaKnown RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 DEFB118Q96PH6 123 aa13.01□□□□□ -0.33
HERC1-214ENST00000561400 WRAP73Q9P2S5 460 aaPredicted RBP13.01□□□□□ -0.33
HERC1-214ENST00000561400 PPFIA4O75335 1185 aa13□□□□□ -0.33
HERC1-214ENST00000561400 MED24O75448 989 aa13□□□□□ -0.33
HERC1-214ENST00000561400 SLITRK3O94933 977 aa13□□□□□ -0.33
HERC1-214ENST00000561400 ECM1Q16610 540 aa13□□□□□ -0.33
HERC1-214ENST00000561400 GNASQ5JWF2 1037 aa13□□□□□ -0.33
HERC1-214ENST00000561400 C1QTNF12Q5T7M4 302 aa13□□□□□ -0.33
HERC1-214ENST00000561400 CATSPER3Q86XQ3 398 aa13□□□□□ -0.33
HERC1-214ENST00000561400 TRIM50Q86XT4 487 aa13□□□□□ -0.33
HERC1-214ENST00000561400 KLHDC9Q8NEP7 349 aa13□□□□□ -0.33
HERC1-214ENST00000561400 SNX29Q8TEQ0 813 aa13□□□□□ -0.33
HERC1-214ENST00000561400 DYDC2Q96IM9 177 aa13□□□□□ -0.33
HERC1-214ENST00000561400 CXorf56Q9H5V9 222 aa13□□□□□ -0.33
HERC1-214ENST00000561400 PSAPP07602 524 aa13□□□□□ -0.33
HERC1-214ENST00000561400 CPT1AP50416 773 aa13□□□□□ -0.33
HERC1-214ENST00000561400 CTTNQ14247 550 aaKnown RBP13□□□□□ -0.33
HERC1-214ENST00000561400 RESP18Q5W5W9 173 aa13□□□□□ -0.33
HERC1-214ENST00000561400 MIS18BP1Q6P0N0 1132 aa13□□□□□ -0.33
HERC1-214ENST00000561400 RASSF4Q9H2L5 321 aa13□□□□□ -0.33
HERC1-214ENST00000561400 SPC25Q9HBM1 224 aa13□□□□□ -0.33
HERC1-214ENST00000561400 GABBR1Q9UBS5 961 aa13□□□□□ -0.33
HERC1-214ENST00000561400 ZNF862O60290 1169 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 TRAK2O60296 914 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 LGR5O75473 907 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 LGALS2P05162 132 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 ZNF286BP0CG31 522 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 CMA1P23946 247 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 RPA1P27694 616 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 MCM4P33991 863 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 UBA7P41226 1012 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 LRRC41Q15345 812 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 DGKDQ16760 1214 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 KRT79Q5XKE5 535 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 CCSAPQ6IQ19 270 aaPredicted RBP12.99□□□□□ -0.33
HERC1-214ENST00000561400 CABP7Q86V35 215 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 PDCL2Q8N4E4 241 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 CCSER1Q9C0I3 900 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 LMBRD1Q9NUN5 540 aa12.99□□□□□ -0.33
HERC1-214ENST00000561400 A0A087X0B3 334 aa12.98□□□□□ -0.33
HERC1-214ENST00000561400 A0A1B0GVL5 298 aa12.98□□□□□ -0.33
HERC1-214ENST00000561400 A0A1W2PQ27 194 aa12.98□□□□□ -0.33
HERC1-214ENST00000561400 A0A1W2PQ64 194 aa12.98□□□□□ -0.33
HERC1-214ENST00000561400 A0A1W2PQD8 194 aa12.98□□□□□ -0.33
HERC1-214ENST00000561400 POTEB3A0JP26 581 aa12.98□□□□□ -0.33
HERC1-214ENST00000561400 BACH1O14867 736 aa12.98□□□□□ -0.33
HERC1-214ENST00000561400 P4HBP07237 508 aaKnown RBP12.98□□□□□ -0.33
HERC1-214ENST00000561400 ATP4AP20648 1035 aa12.98□□□□□ -0.33
HERC1-214ENST00000561400 CST5P28325 142 aaPredicted RBP12.98□□□□□ -0.33
HERC1-214ENST00000561400 CCT6AP40227 531 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms