RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, human

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF9-213	ENST00000561342	CALM3	P0DP25	149 aa		13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	MCM5	P33992	734 aa		13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	ANTXR2	P58335	489 aa		13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	SMARCC2	Q8TAQ2	1214 aa		13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	MICAL1	Q8TDZ2	1067 aa		13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	GPR20	Q99678	358 aa		13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	LY9	Q9HBG7	655 aa		13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	SENP2	Q9HC62	589 aa		13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	TSHZ2	Q9NRE2	1034 aa		13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	RBM8A	Q9Y5S9	174 aa	Known RBP	13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.58	□□□□□ -0.24
IRF9-213	ENST00000561342	BRD1	O95696	1058 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	ITGB1	P05556	798 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	CTSH	P09668	335 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	SP100	P23497	879 aa	Predicted RBP	13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	DNAJB1	P25685	340 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	LIFR	P42702	1097 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	ANGPT1	Q15389	498 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	CYFIP1	Q7L576	1253 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	SPPL3	Q8TCT6	385 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	POF1B	Q8WVV4	589 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	GPRASP2	Q96D09	838 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	RNPEP	Q9H4A4	650 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	MYO7A	Q13402	2215 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	MICAL3	Q7RTP6	2002 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	NRCAM	Q92823	1304 aa		13.57	□□□□□ -0.24
IRF9-213	ENST00000561342	CCDC69	A6NI79	296 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	MEIS2	O14770	477 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	MAFG	O15525	162 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	PRC1	O43663	620 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	RPLP2	P05387	115 aa	Known RBP	13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	SEMA3F	Q13275	785 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	HIC1	Q14526	733 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	TAF2	Q6P1X5	1199 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	NFXL1	Q6ZNB6	911 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	CDCA3	Q99618	268 aa	Predicted RBP	13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	TAF6L	Q9Y6J9	622 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	NCOR2	Q9Y618	2525 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	VPS13A	Q96RL7	3174 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	DNAH14	Q0VDD8	3507 aa		13.56	□□□□□ -0.24
IRF9-213	ENST00000561342	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	SH2B2	O14492	632 aa	Predicted RBP	13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	TREH	O43280	583 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	SORBS3	O60504	671 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	ADAM17	P78536	824 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	FAM26D	Q5JW98	314 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	USP17L6P	Q6QN14	398 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	KLHL23	Q8NBE8	558 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	FLCN	Q8NFG4	579 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	ATP8B4	Q8TF62	1192 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	ZNF689	Q96CS4	500 aa	Predicted RBP	13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	PSTPIP2	Q9H939	334 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	EHMT1	Q9H9B1	1298 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	RC3H2	Q9HBD1	1191 aa	Known RBP	13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	RTEL1	Q9NZ71	1219 aa		13.55	□□□□□ -0.24
IRF9-213	ENST00000561342	PER2	O15055	1255 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	SDHB	P21912	280 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	RSPH3	Q86UC2	560 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	CCDC105	Q8IYK2	499 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	CYP2W1	Q8TAV3	490 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	PIBF1	Q8WXW3	757 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	RUBCN	Q92622	972 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	TNPO1	Q92973	898 aa	Known RBP	13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	ZFP91	Q96JP5	570 aa	Predicted RBP	13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	OSBPL7	Q9BZF2	842 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	SETD4	Q9NVD3	440 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	SLC12A7	Q9Y666	1083 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	RALGAPA2	Q2PPJ7	1873 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	MYH7B	A7E2Y1	1941 aa		13.54	□□□□□ -0.24
IRF9-213	ENST00000561342	SPDYE3	A6NKU9	549 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	DGKI	O75912	1065 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	ARHGAP4	P98171	946 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	COL9A2	Q14055	689 aa	Predicted RBP	13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	SGMS1	Q86VZ5	419 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	SRBD1	Q8N5C6	995 aa	Known RBP	13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	LMBR1	Q8WVP7	490 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	SEPT1	Q8WYJ6	367 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	RTP3	Q9BQQ7	232 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	MYL10	Q9BUA6	226 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	LSG1	Q9H089	658 aa	Known RBP	13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	S1PR5	Q9H228	398 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	BCAS3	Q9H6U6	928 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	ERAP1	Q9NZ08	941 aa		13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	MRPL42	Q9Y6G3	142 aa	Known RBP	13.53	□□□□□ -0.24
IRF9-213	ENST00000561342	SLC27A2	O14975	620 aa		13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	PPFIA3	O75145	1194 aa		13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	PLEKHA8P1	O95397	391 aa		13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	KCNA2	P16389	499 aa		13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	AOC1	P19801	751 aa		13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	TCF7	P36402	384 aa	Predicted RBP	13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	TEC	P42680	631 aa		13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	RBM10	P98175	930 aa	Known RBP	13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	MTMR1	Q13613	665 aa		13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	UTP14C	Q5TAP6	766 aa	Known RBP	13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	RNF20	Q5VTR2	975 aa		13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	KIAA0319	Q5VV43	1072 aa		13.52	□□□□□ -0.25
IRF9-213	ENST00000561342	ANKRD54	Q6NXT1	300 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms