RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TCP11Q8WWU5 503 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 DYDC2Q96IM9 177 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 PPP1R12CQ9BZL4 782 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 TRPV6Q9H1D0 765 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 RNPEPQ9H4A4 650 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.98□□□□□ -0.49
TPM1-229ENST00000561242 KCNG1Q9UIX4 513 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 AKT3Q9Y243 479 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 ZSWIM8A7E2V4 1837 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 COL1A2P08123 1366 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 ADAMTS3O15072 1205 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 CTAGE5O15320 804 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 DHX15O43143 795 aaKnown RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 B4GALT4O60513 344 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 CAND2O75155 1236 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 CCNE2O96020 404 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 XRCC6P12956 609 aaKnown RBP eCLIP11.97□□□□□ -0.49
TPM1-229ENST00000561242 SYN1P17600 705 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 MUTP22033 750 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 KLRC1P26715 233 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 YWHABP31946 246 aaKnown RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 RFC2P35250 354 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 CDK7P50613 346 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
TPM1-229ENST00000561242 PRKCEQ02156 737 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 FPGSQ05932 587 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 PLCB4Q15147 1175 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 KCTD17Q8N5Z5 321 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 KRI1Q8N9T8 703 aaKnown RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 HAS1Q92839 578 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 GJA10Q969M2 543 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 LENG9Q96B70 501 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 MTMR9Q96QG7 549 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 PYM1Q9BRP8 204 aaKnown RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 LXNQ9BS40 222 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 INO80BQ9C086 356 aaPredicted RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 LRRC27Q9C0I9 530 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 SCAND2PQ9GZW5 306 aaPredicted RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 FAM49AQ9H0Q0 323 aaPredicted RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 TRMT13Q9NUP7 481 aaKnown RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 RNF216Q9NWF9 866 aaPredicted RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 TFIP11Q9UBB9 837 aaKnown RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 GINS2Q9Y248 185 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 MAFBQ9Y5Q3 323 aaPredicted RBP11.97□□□□□ -0.49
TPM1-229ENST00000561242 PARP14Q460N5 1801 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 CEP350Q5VT06 3117 aa11.97□□□□□ -0.49
TPM1-229ENST00000561242 RSPH10B2B2RC85 870 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 HAS3O00219 553 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 SPTLC2O15270 562 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 SLC26A4O43511 780 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 GAS2O43903 313 aaKnown RBP11.96□□□□□ -0.49
TPM1-229ENST00000561242 TIMP1P01033 207 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 RSPH10BP0C881 870 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 HOXD8P13378 290 aaPredicted RBP11.96□□□□□ -0.49
TPM1-229ENST00000561242 RFC5P40937 340 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 ATP2C1P98194 919 aaPredicted RBP11.96□□□□□ -0.49
TPM1-229ENST00000561242 RESTQ13127 1097 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 TFDP1Q14186 410 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 NBR1Q14596 966 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 SNX17Q15036 470 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 TMEM132AQ24JP5 1023 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 GDF6Q6KF10 455 aaPredicted RBP11.96□□□□□ -0.49
TPM1-229ENST00000561242 CCDC60Q8IWA6 550 aaPredicted RBP11.96□□□□□ -0.49
TPM1-229ENST00000561242 FAM126BQ8IXS8 530 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 C4orf19Q8IY42 314 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 KAT2BQ92831 832 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 SPATA32Q96LK8 384 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 POLR3CQ9BUI4 534 aaPredicted RBP11.96□□□□□ -0.49
TPM1-229ENST00000561242 UBE2OQ9C0C9 1292 aaKnown RBP11.96□□□□□ -0.49
TPM1-229ENST00000561242 BCAS3Q9H6U6 928 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 ANKEF1Q9NU02 776 aa11.96□□□□□ -0.49
TPM1-229ENST00000561242 CIZ1Q9ULV3 898 aaPredicted RBP11.96□□□□□ -0.49
TPM1-229ENST00000561242 YEATS4O95619 227 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 PFKMP08237 780 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 SELPP16109 830 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 MARCKSP29966 332 aaPredicted RBP11.95□□□□□ -0.5
TPM1-229ENST00000561242 CCL23P55773 120 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 FAAP100Q0VG06 881 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 EFCAB12Q6NXP0 572 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 CABP7Q86V35 215 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 SLC43A3Q8NBI5 491 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 NLRP7Q8WX94 980 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 IFT74Q96LB3 600 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 TMEM60Q9H2L4 133 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 RGL1Q9NZL6 768 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 CHMP5Q9NZZ3 219 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 KIAA1024Q9UPX6 916 aa11.95□□□□□ -0.5
TPM1-229ENST00000561242 MYH6P13533 1939 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 IGKV6D-21A0A0A0MT36 114 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 SMIM35A0A1B0GVV1 85 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 POTEMA6NI47 508 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 ZBBXA8MT70 800 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 GOLGA6L22H0YM25 854 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 KIAA0355O15063 1070 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 ASAP2O43150 1006 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 TREHO43280 583 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 DGAT1O75907 488 aa11.94□□□□□ -0.5
TPM1-229ENST00000561242 FGBP02675 491 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms