RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MRGBPQ9NV56 204 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 ARGLU1Q9NWB6 273 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 GFOD1Q9NXC2 390 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 NSMCE4AQ9NXX6 385 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 DACT1Q9NYF0 836 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 NKIRAS2Q9NYR9 191 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 H2AFY2Q9P0M6 372 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 PDP2Q9P2J9 529 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 CFDP1Q9UEE9 299 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 GDF2Q9UK05 429 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 ATXN7L1Q9ULK2 861 aaPredicted RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 SLC6A14Q9UN76 642 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 EDARQ9UNE0 448 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 STXBP5LQ9Y2K9 1186 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 TMEM98Q9Y2Y6 226 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGA9Q9Y5G4 932 aaKnown RBP2.35□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGA8Q9Y5G5 932 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGA7Q9Y5G6 932 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGA6Q9Y5G7 932 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGA3Q9Y5H0 932 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 PCDHGA2Q9Y5H1 932 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 SPO11Q9Y5K1 396 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 BACE2Q9Y5Z0 518 aa2.35□□□□□ -2.03
RTF1-207ENST00000561076 KAT6BQ8WYB5 2073 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CCDC196A0A1B0GTZ2 297 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 C2orf71A6NGG8 1288 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 A6NLC8 198 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 A6NNZ2 444 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 FAM155AB1AL88 458 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 ZBTB42B2RXF5 422 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 POTEB2H3BUK9 544 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 FSCN2O14926 492 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PLOD3O60568 738 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 TBCAO75347 108 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 SOAT2O75908 522 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 APOL3O95236 402 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 STARD3NLO95772 234 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 DDX58O95786 925 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 BAG2O95816 211 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CST3P01034 146 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 CD4P01730 458 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 FTLP02792 175 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 CHGBP05060 677 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 GSNP06396 782 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 THBDP07204 575 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 NCAM1P13591 858 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 BRAFP15056 766 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ALOX15P16050 662 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 KCNA6P17658 529 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PAMP19021 973 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CAPN3P20807 821 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 AGXTP21549 392 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 C5AR1P21730 350 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ENPP1P22413 925 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 GRK3P35626 688 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PIK3CBP42338 1070 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 GPR3P46089 330 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 NPTX2P47972 431 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CEBPAP49715 358 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 SNX16P57768 344 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PHC1P78364 1004 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 MPP1Q00013 466 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 APBA1Q02410 837 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 SPIRE1Q08AE8 756 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PRPF4BQ13523 1007 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 FGL2Q14314 439 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 TAF5Q15542 800 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 TIGD6Q17RP2 521 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.34□□□□□ -2.03
RTF1-207ENST00000561076 ODF2Q5BJF6 829 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ZC3H12AQ5D1E8 599 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 RILPL1Q5EBL4 403 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 C1QTNF12Q5T7M4 302 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ISM2Q6H9L7 571 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PSAPL1Q6NUJ1 521 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CCDC62Q6P9F0 684 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ABHD17CQ6PCB6 329 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 IGF2-ASQ6U949 168 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CCDC129Q6ZRS4 1044 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 ESPNLQ6ZVH7 1005 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 MIGA2Q7L4E1 593 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 MAEAQ7L5Y9 396 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CCDC91Q7Z6B0 441 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 TBC1D1Q86TI0 1168 aaPredicted RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 ZNF598Q86UK7 904 aaKnown RBP2.34□□□□□ -2.03
RTF1-207ENST00000561076 IQCA1Q86XH1 822 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 NME9Q86XW9 330 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 WFDC8Q8IUA0 241 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 SIRT2Q8IXJ6 389 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 TEX11Q8IYF3 940 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 GALNT15Q8N3T1 639 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 TCP11L2Q8N4U5 519 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 OXR1Q8N573 874 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 KLHL23Q8NBE8 558 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PCYOX1LQ8NBM8 494 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 CCDC150Q8NCX0 1101 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 MSANTD4Q8NCY6 345 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 RNF214Q8ND24 703 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 FLCNQ8NFG4 579 aa2.34□□□□□ -2.03
RTF1-207ENST00000561076 PCDH19Q8TAB3 1148 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms