RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	CNNM1	Q9NRU3	951 aa		8.84	□□□□□ -0.99
MARK3-223	ENST00000561071	FZD1	Q9UP38	647 aa		8.84	□□□□□ -0.99
MARK3-223	ENST00000561071	ST14	Q9Y5Y6	855 aa		8.84	□□□□□ -0.99
MARK3-223	ENST00000561071	CASP8AP2	Q9UKL3	1982 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	PSME4	Q14997	1843 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	CCDC85C	A6NKD9	419 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071		B2RBV5	119 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	ALDH1L1	O75891	902 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	GNPTAB	Q3T906	1256 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	AXDND1	Q5T1B0	1012 aa	Predicted RBP	8.83	□□□□□ -1
MARK3-223	ENST00000561071	DCAF15	Q66K64	600 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	VHLL	Q6RSH7	139 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	RASAL3	Q86YV0	1011 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	CELF2-AS1	Q8N7Q2	184 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	SSH1	Q8WYL5	1049 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	HSPA12B	Q96MM6	686 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	DNAJC2	Q99543	621 aa	Known RBP	8.83	□□□□□ -1
MARK3-223	ENST00000561071	RNF186	Q9NXI6	227 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	KCNH3	Q9ULD8	1083 aa		8.83	□□□□□ -1
MARK3-223	ENST00000561071	R3HCC1	Q9Y3T6	440 aa	Known RBP	8.83	□□□□□ -1
MARK3-223	ENST00000561071	CACNA1F	O60840	1977 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	AOX1	Q06278	1338 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	PITPNM2	Q9BZ72	1349 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	ZNF646	O15015	1829 aa	Predicted RBP	8.82	□□□□□ -1
MARK3-223	ENST00000561071	SHISA3	A0PJX4	238 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	WASH4P	A8MWX3	477 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071		H3BS24	57 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	CA12	O43570	354 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	GYG1	P46976	350 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	SLC7A5	Q01650	507 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	C6orf15	Q6UXA7	325 aa	Predicted RBP	8.82	□□□□□ -1
MARK3-223	ENST00000561071	CKAP2L	Q8IYA6	745 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	PIWIL2	Q8TC59	973 aa	Known RBP	8.82	□□□□□ -1
MARK3-223	ENST00000561071	ARMC5	Q96C12	935 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	ZBED3	Q96IU2	234 aa	Predicted RBP	8.82	□□□□□ -1
MARK3-223	ENST00000561071	MCOLN1	Q9GZU1	580 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	BICC1	Q9H694	974 aa	Known RBP	8.82	□□□□□ -1
MARK3-223	ENST00000561071	ST7	Q9NRC1	585 aa		8.82	□□□□□ -1
MARK3-223	ENST00000561071	MYO3B	Q8WXR4	1341 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	TMEM265	A0A087WTH1	108 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	CLRN2	A0PK11	232 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	SHOX	O15266	292 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	IL1R1	P14778	569 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	SPINK2	P20155	84 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	CD96	P40200	585 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	SLFN5	Q08AF3	891 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	AUH	Q13825	339 aa	Known RBP	8.81	□□□□□ -1
MARK3-223	ENST00000561071	DLGAP5	Q15398	846 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	LRRC24	Q50LG9	513 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	KIAA1211L	Q6NV74	962 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	C15orf52	Q6ZUT6	534 aa	Known RBP	8.81	□□□□□ -1
MARK3-223	ENST00000561071	ZNF804A	Q7Z570	1209 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	TMC3	Q7Z5M5	1100 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	ANKRD44	Q8N8A2	993 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	KLHDC4	Q8TBB5	520 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	PRMT6	Q96LA8	375 aa	Predicted RBP	8.81	□□□□□ -1
MARK3-223	ENST00000561071	PRDM14	Q9GZV8	571 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	DUSP15	Q9H1R2	295 aa	Predicted RBP	8.81	□□□□□ -1
MARK3-223	ENST00000561071	SEMA3G	Q9NS98	782 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	HDAC9	Q9UKV0	1011 aa		8.81	□□□□□ -1
MARK3-223	ENST00000561071	CLCN7	P51798	805 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	FKBP1B	P68106	108 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	RBL2	Q08999	1139 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	BNIP3	Q12983	259 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	RAB33A	Q14088	237 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	BBS9	Q3SYG4	887 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	CFAP100	Q494V2	611 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	DTX1	Q86Y01	620 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	C7orf61	Q8IZ16	206 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	FAM84B	Q96KN1	310 aa	Predicted RBP	8.8	□□□□□ -1
MARK3-223	ENST00000561071	USP44	Q9H0E7	712 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	DEFB129	Q9H1M3	183 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	ZSWIM5	Q9P217	1185 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	FBXL21	Q9UKT6	434 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	RIPOR2	Q9Y4F9	1068 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	UTY	O14607	1347 aa		8.8	□□□□□ -1
MARK3-223	ENST00000561071	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	8.79	□□□□□ -1
MARK3-223	ENST00000561071	CBFA2T2	O43439	604 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	DDAH1	O94760	285 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	TBC1D8	O95759	1140 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	SRF	P11831	508 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	HIBADH	P31937	336 aa	Known RBP	8.79	□□□□□ -1
MARK3-223	ENST00000561071	NF2	P35240	595 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	RBM5	P52756	815 aa	Known RBP eCLIP	8.79	□□□□□ -1
MARK3-223	ENST00000561071	FXN	Q16595	210 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	RABL6	Q3YEC7	729 aa	Predicted RBP	8.79	□□□□□ -1
MARK3-223	ENST00000561071	APOBEC3F	Q8IUX4	373 aa	Known RBP	8.79	□□□□□ -1
MARK3-223	ENST00000561071	FAM178B	Q8IXR5	827 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	TDRD7	Q8NHU6	1098 aa	Known RBP	8.79	□□□□□ -1
MARK3-223	ENST00000561071	UBE2F	Q969M7	185 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	HRASLS5	Q96KN8	279 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	HAUS7	Q99871	368 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	TRIM55	Q9BYV6	548 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	GPR62	Q9BZJ7	368 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	VEZT	Q9HBM0	779 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	ANGEL1	Q9UNK9	670 aa	Known RBP	8.79	□□□□□ -1
MARK3-223	ENST00000561071	ZNF451	Q9Y4E5	1061 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	PCDHB12	Q9Y5F1	795 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	SNX11	Q9Y5W9	270 aa		8.79	□□□□□ -1
MARK3-223	ENST00000561071	PAPPA2	Q9BXP8	1791 aa		8.78	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms