RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 ZNF365Q70YC5 407 aa10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 OTOP2Q7RTS6 562 aa10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 RSPH3Q86UC2 560 aa10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 CCDC60Q8IWA6 550 aaPredicted RBP10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 HSCBQ8IWL3 235 aa10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 SLFN12Q8IYM2 578 aa10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 RNPC3Q96LT9 517 aaKnown RBP10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 MBOAT7Q96N66 472 aa10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 TRIP12Q14669 1992 aaPredicted RBP10.17□□□□□ -0.78
SNRPA1-214ENST00000560987 EMSYQ7Z589 1322 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 DDX11L8A8MPP1 907 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 ZBBXA8MT70 800 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 RSPH10B2B2RC85 870 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 K7ELQ4 463 aaPredicted RBP10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 TBX3O15119 743 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 NEMFO60524 1076 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 RSPH10BP0C881 870 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 KLRC1P26715 233 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 EPHB4P54760 987 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 ZNF484Q5JVG2 852 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 C9orf50Q5SZB4 431 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 ZNF618Q5T7W0 954 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 NCAPH2Q6IBW4 605 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 LRRC8DQ7L1W4 858 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 SERINC5Q86VE9 423 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 NOSTRINQ8IVI9 506 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 ETNPPLQ8TBG4 499 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 AFAP1L1Q8TED9 768 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 LMBR1Q8WVP7 490 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 TRAPPC12Q8WVT3 735 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 DNAJB3Q8WWF6 145 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 TNFRSF25Q93038 417 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.16□□□□□ -0.782e-8■□□□□ 10.1
SNRPA1-214ENST00000560987 WNT8AQ9H1J5 351 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 MTIF3Q9H2K0 278 aaKnown RBP10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 TUBE1Q9UJT0 475 aa10.16□□□□□ -0.78
SNRPA1-214ENST00000560987 TRIOBPQ9H2D6 2365 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 IGKV6D-21A0A0A0MT36 114 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 VPS37CA5D8V6 355 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 DKC1O60832 514 aaKnown RBP eCLIP10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 CTSHP09668 335 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 ACTN1P12814 892 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 RFC2P35250 354 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 MMRN1Q13201 1228 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 TTC38Q5R3I4 469 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 TMEM240Q5SV17 173 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 FAM109BQ6ICB4 259 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 PSRC1Q6PGN9 363 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 C16orf59Q7L2K0 433 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 TPH2Q8IWU9 490 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 METTL13Q8N6R0 699 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 SPRYD3Q8NCJ5 442 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 BANK1Q8NDB2 785 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 RDM1Q8NG50 284 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 ATP8B4Q8TF62 1192 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 DHX38Q92620 1227 aaKnown RBP10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 FAM167AQ96KS9 214 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 FAM49AQ9H0Q0 323 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 TTC12Q9H892 705 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 KCNMB3Q9NPA1 279 aa10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 MAFBQ9Y5Q3 323 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-214ENST00000560987 MYH9P35579 1960 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 KIF28PB7ZC32 967 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 M0QZ92 97 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 EML1O00423 815 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 PARNO95453 639 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 P4HBP07237 508 aaKnown RBP10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 ATP4AP20648 1035 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 PDCP20941 246 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 U2AF2P26368 475 aaKnown RBP eCLIP10.14□□□□□ -0.792e-6■□□□□ 8.1
SNRPA1-214ENST00000560987 CUL4AQ13619 759 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 EPHA7Q15375 998 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 MARCH8Q5T0T0 291 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 ZNF697Q5TEC3 545 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 IER5Q5VY09 327 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 TAF2Q6P1X5 1199 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 MTHFD1LQ6UB35 978 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 RUFY4Q6ZNE9 571 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 HAS1Q92839 578 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 WNT8BQ93098 351 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 ZBTB10Q96DT7 871 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 CTAGE1Q96RT6 745 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 MTMR10Q9NXD2 777 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 CEP131Q9UPN4 1083 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 STXBP5LQ9Y2K9 1186 aa10.14□□□□□ -0.79
SNRPA1-214ENST00000560987 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 OATP04181 439 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 PFKMP08237 780 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 TMOD1P28289 359 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 TECP42680 631 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 QARSP47897 775 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 TRAPPC10P48553 1259 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 PSMC5P62195 406 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 ADAM17P78536 824 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 PRKCEQ02156 737 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 TMEM62Q0P6H9 643 aa10.13□□□□□ -0.79
SNRPA1-214ENST00000560987 PPP2R5CQ13362 524 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms