RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 COL13A1Q5TAT6 717 aaPredicted RBP7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 NCAPH2Q6IBW4 605 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 ABHD15Q6UXT9 468 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 DTHD1Q6ZMT9 781 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 TRIM50Q86XT4 487 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 HOMEZQ8IX15 550 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 RDM1Q8NG50 284 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 FERMT2Q96AC1 680 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 SPATA32Q96LK8 384 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 SPATA33Q96N06 139 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 CLIC6Q96NY7 704 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 DEFB118Q96PH6 123 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 MMTAG2Q9BU76 263 aaKnown RBP7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 SCAND2PQ9GZW5 306 aaPredicted RBP7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 RNF208Q9H0X6 261 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 CSRNP2Q9H175 543 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 MLXIPQ9HAP2 919 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 WRAP73Q9P2S5 460 aaPredicted RBP7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 OGDHLQ9ULD0 1010 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 PCDHA7Q9UN72 937 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 PCDHA12Q9UN75 941 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 ALPK3Q96L96 1907 aa7.91□□□□□ -1.14
CTDSPL2-210ENST00000560834 SIP14410 1827 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 NOP56O00567 594 aaKnown RBP7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 MARCH6O60337 910 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 CUTAO60888 179 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 MED24O75448 989 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 F2P00734 622 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 LGALS2P05162 132 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 GJB1P08034 283 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 C6orf222P0C671 652 aaPredicted RBP7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 CDC25AP30304 524 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 SFNP31947 248 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 GJA8P48165 433 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 PURAQ00577 322 aaKnown RBP7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 EPHA7Q15375 998 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 SHC4Q6S5L8 630 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 USP49Q70CQ1 688 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 MIER3Q7Z3K6 550 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 NEK9Q8TD19 979 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 AFAP1L1Q8TED9 768 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 U2AF1L4Q8WU68 220 aaKnown RBP7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 SEPT1Q8WYJ6 367 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 DYDC2Q96IM9 177 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 AK8Q96MA6 479 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 PHOX2BQ99453 314 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 EIF2AK1Q9BQI3 630 aaKnown RBP7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 C16orf70Q9BSU1 422 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 AP5M1Q9H0R1 490 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 DISC1Q9NRI5 854 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 LRWD1Q9UFC0 647 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 TCEAL9Q9UHQ7 104 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 PCDHA10Q9Y5I2 948 aa7.9□□□□□ -1.14
CTDSPL2-210ENST00000560834 TANC1Q9C0D5 1861 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 A0A087X0B3 334 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 HAS3O00219 553 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 DNM1LO00429 736 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 ZNF862O60290 1169 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 STBD1O95210 358 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 PSAPP07602 524 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 SPATA31C1P0DKV0 1188 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 ATP4AP20648 1035 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 ME1P48163 572 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 PRKCEQ02156 737 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 CYP4A11Q02928 519 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 PDIA5Q14554 519 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 ECM1Q16610 540 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 DGKDQ16760 1214 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 TMEM119Q4V9L6 283 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 SPECC1Q5M775 1068 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 HYIQ5T013 277 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 UTP14CQ5TAP6 766 aaKnown RBP7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 RESP18Q5W5W9 173 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 HAUS3Q68CZ6 603 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 MIS18BP1Q6P0N0 1132 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 RNF180Q86T96 592 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 BANK1Q8NDB2 785 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 SNX29Q8TEQ0 813 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 LRRC15Q8TF66 581 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 SYMPKQ92797 1274 aaKnown RBP7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 KAT2BQ92831 832 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 PNMA5Q96PV4 448 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 HSD17B14Q9BPX1 270 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 LXNQ9BS40 222 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 RAB34Q9BZG1 259 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 GOLPH3LQ9H4A5 285 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 SPC25Q9HBM1 224 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 RGL1Q9NZL6 768 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 GABBR1Q9UBS5 961 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 SAMM50Q9Y512 469 aa7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 MAFBQ9Y5Q3 323 aaPredicted RBP7.89□□□□□ -1.15
CTDSPL2-210ENST00000560834 KDM3AQ9Y4C1 1321 aa7.88□□□□□ -1.15
CTDSPL2-210ENST00000560834 FAM237AA0A1B0GTK4 181 aa7.88□□□□□ -1.15
CTDSPL2-210ENST00000560834 A0A1W2PQ27 194 aa7.88□□□□□ -1.15
CTDSPL2-210ENST00000560834 A0A1W2PQ64 194 aa7.88□□□□□ -1.15
CTDSPL2-210ENST00000560834 A0A1W2PQD8 194 aa7.88□□□□□ -1.15
CTDSPL2-210ENST00000560834 MOXD2PA6NHM9 499 aa7.88□□□□□ -1.15
CTDSPL2-210ENST00000560834 BACH1O14867 736 aa7.88□□□□□ -1.15
CTDSPL2-210ENST00000560834 SLITRK3O94933 977 aa7.88□□□□□ -1.15
CTDSPL2-210ENST00000560834 LYPLA2O95372 231 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms