RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 SEMA4AQ9H3S1 761 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 RNF41Q9H4P4 317 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-215ENST00000560424 PCDHB7Q9Y5E2 793 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 PCDHA1Q9Y5I3 950 aa10.7□□□□□ -0.7
SMAD3-215ENST00000560424 C2CD4DB7Z1M9 353 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 GCOM1H8Y6P7 765 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-215ENST00000560424 STK25O00506 426 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 STAM2O75886 525 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 POLR2MP0CAP2 368 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 CA8P35219 290 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 ANP32AP39687 249 aaKnown RBP10.69□□□□□ -0.7
SMAD3-215ENST00000560424 MRPS6P82932 125 aaKnown RBP10.69□□□□□ -0.7
SMAD3-215ENST00000560424 TRAF1Q13077 416 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 DGKHQ86XP1 1220 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 TMEM87AQ8NBN3 555 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 RILPL2Q969X0 211 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 CNTNAP3BQ96NU0 1288 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 TCF25Q9BQ70 676 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 ESYT1Q9BSJ8 1104 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 CNTNAP3Q9BZ76 1288 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 S1PR5Q9H228 398 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 FBXL21Q9UKT6 434 aa10.69□□□□□ -0.7
SMAD3-215ENST00000560424 TBKBP1A7MCY6 615 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 FOXP2O15409 715 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 SGSM2O43147 1006 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 FIBPO43427 364 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 FGAP02671 866 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 ASGR2P07307 311 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 MTHFRP42898 656 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 ERVFC1P60507 584 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 IGBP1P78318 339 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 ADAM17P78536 824 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 ITIH3Q06033 890 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 ALX1Q15699 326 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 GRIK4Q16099 956 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 SYCE2Q6PIF2 218 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 TMEM184AQ6ZMB5 413 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 IL31RAQ8NI17 732 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 RUFY2Q8WXA3 655 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 LINC01599Q8WXQ3 324 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 RTP3Q9BQQ7 232 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 C22orf23Q9BZE7 217 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 FAM49AQ9H0Q0 323 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-215ENST00000560424 SMOC2Q9H3U7 446 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 POMKQ9H5K3 350 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 JMJD4Q9H9V9 463 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 HELLSQ9NRZ9 838 aa10.68□□□□□ -0.7
SMAD3-215ENST00000560424 DBR1Q9UK59 544 aaKnown RBP10.68□□□□□ -0.7
SMAD3-215ENST00000560424 GVINP1Q7Z2Y8 2422 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 LAG3P18627 525 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 AOC1P19801 751 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 MARK3P27448 753 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 TCF7P36402 384 aaPredicted RBP10.67□□□□□ -0.7
SMAD3-215ENST00000560424 GATMP50440 423 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 MFAP1P55081 439 aaKnown RBP10.67□□□□□ -0.7
SMAD3-215ENST00000560424 KRT17Q04695 432 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 NFX1Q12986 1120 aaKnown RBP10.67□□□□□ -0.7
SMAD3-215ENST00000560424 BMS1Q14692 1282 aaKnown RBP10.67□□□□□ -0.7
SMAD3-215ENST00000560424 ZC3H14Q6PJT7 736 aaKnown RBP10.67□□□□□ -0.7
SMAD3-215ENST00000560424 TMC7Q7Z402 723 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 HOMER1Q86YM7 354 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 CCDC105Q8IYK2 499 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 COLGALT1Q8NBJ5 622 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 GIMAP8Q8ND71 665 aaPredicted RBP10.67□□□□□ -0.7
SMAD3-215ENST00000560424 CYP2W1Q8TAV3 490 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 RASGRP4Q8TDF6 673 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 GLG1Q92896 1179 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 TNPO1Q92973 898 aaKnown RBP10.67□□□□□ -0.7
SMAD3-215ENST00000560424 ADAM7Q9H2U9 754 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 BCAS3Q9H6U6 928 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 AGO3Q9H9G7 860 aaKnown RBP10.67□□□□□ -0.7
SMAD3-215ENST00000560424 NGRNQ9NPE2 291 aaKnown RBP10.67□□□□□ -0.7
SMAD3-215ENST00000560424 ERAP1Q9NZ08 941 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 RTEL1Q9NZ71 1219 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 LIMD1Q9UGP4 676 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 PADI3Q9ULW8 664 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 LZTS1Q9Y250 596 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 TRPV2Q9Y5S1 764 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 SQORQ9Y6N5 450 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 DNAH14Q0VDD8 3507 aa10.67□□□□□ -0.7
SMAD3-215ENST00000560424 DENND3A2RUS2 1198 aa10.66□□□□□ -0.7
SMAD3-215ENST00000560424 SPDYE4A6NLX3 237 aa10.66□□□□□ -0.7
SMAD3-215ENST00000560424 FSCN2O14926 492 aa10.66□□□□□ -0.7
SMAD3-215ENST00000560424 ZBTB5O15062 677 aa10.66□□□□□ -0.7
SMAD3-215ENST00000560424 SARSP49591 514 aaKnown RBP10.66□□□□□ -0.7
SMAD3-215ENST00000560424 GHRHRQ02643 423 aa10.66□□□□□ -0.7
SMAD3-215ENST00000560424 TMEM62Q0P6H9 643 aa10.66□□□□□ -0.7
SMAD3-215ENST00000560424 APOBRQ0VD83 1088 aa10.66□□□□□ -0.7
SMAD3-215ENST00000560424 RTN4RL1Q86UN2 441 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-215ENST00000560424 NLRX1Q86UT6 975 aa10.66□□□□□ -0.7
SMAD3-215ENST00000560424 DTWD2Q8NBA8 298 aa10.66□□□□□ -0.7
SMAD3-215ENST00000560424 MRPS27Q92552 414 aaKnown RBP10.66□□□□□ -0.7
SMAD3-215ENST00000560424 ACSF2Q96CM8 615 aaPredicted RBP10.66□□□□□ -0.7
SMAD3-215ENST00000560424 TYW1Q9NV66 732 aaKnown RBP10.66□□□□□ -0.7
SMAD3-215ENST00000560424 MYO10Q9HD67 2058 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 ZMYM6O95789 1325 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 RRN3P2A6NIE6 340 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 SPATA31C2B4DYI2 1134 aa10.65□□□□□ -0.7
SMAD3-215ENST00000560424 ZNF213O14771 459 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms