RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RSRC1Q96IZ7 334 aaKnown RBP14.52□□□□□ -0.08
TRAF3-208ENST00000560371 PHLPP2Q6ZVD8 1323 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 CCNE1P24864 410 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 COPB2P35606 906 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 TNFAIP2Q03169 654 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 SNX1Q13596 522 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 RAB44Q7Z6P3 723 aaPredicted RBP14.52□□□□□ -0.08
TRAF3-208ENST00000560371 FAM20AQ96MK3 541 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 KLHL14Q9P2G3 628 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 CNOT7Q9UIV1 285 aaKnown RBP14.52□□□□□ -0.08
TRAF3-208ENST00000560371 ZNRF3Q9ULT6 936 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 KCNH4Q9UQ05 1017 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 RNF219Q5W0B1 726 aaPredicted RBP14.52□□□□□ -0.09
TRAF3-208ENST00000560371 RHPN2Q8IUC4 686 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 SCN4BQ8IWT1 228 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 SIRT2Q8IXJ6 389 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 ENAHQ8N8S7 591 aaPredicted RBP14.52□□□□□ -0.09
TRAF3-208ENST00000560371 MYRIPQ8NFW9 859 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 KIAA1586Q9HCI6 787 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 GDAQ9Y2T3 454 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 ABCB11O95342 1321 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 F8W8V4 182 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 PMLP29590 882 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 GOLGA8FQ08AF8 430 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 GOLGA8DPQ0D2H9 430 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 IKBKBO14920 756 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 STAT3P40763 770 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 PFKFB3Q16875 520 aaPredicted RBP14.52□□□□□ -0.09
TRAF3-208ENST00000560371 CPVLQ9H3G5 476 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 ACAD9Q9H845 621 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 NGRNQ9NPE2 291 aaKnown RBP14.52□□□□□ -0.09
TRAF3-208ENST00000560371 JRKLQ9Y4A0 524 aa14.52□□□□□ -0.09
TRAF3-208ENST00000560371 ITSN1Q15811 1721 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 HUS1O60921 280 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 KRT33BQ14525 404 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 R3HDM1Q15032 1099 aaKnown RBP14.51□□□□□ -0.09
TRAF3-208ENST00000560371 BZW1Q7L1Q6 419 aaKnown RBP14.51□□□□□ -0.09
TRAF3-208ENST00000560371 CCDC170Q8IYT3 715 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 MTRQ99707 1265 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 ZBBXA8MT70 800 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 CDO1Q16878 200 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 RWDD4Q6NW29 188 aaKnown RBP14.51□□□□□ -0.09
TRAF3-208ENST00000560371 PNMA8AQ86V59 439 aaPredicted RBP14.51□□□□□ -0.09
TRAF3-208ENST00000560371 ERICH1Q86X53 443 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 SPDYE1Q8NFV5 336 aaPredicted RBP14.51□□□□□ -0.09
TRAF3-208ENST00000560371 ZNF302Q9NR11 478 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 DAAM1Q9Y4D1 1078 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 KRT1P04264 644 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 MMEL1Q495T6 779 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 SPATA33Q96N06 139 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 PHLDB2Q86SQ0 1253 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 MCUQ8NE86 351 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 SFNP31947 248 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 ARHGAP25P42331 645 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 TSPY1Q01534 308 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 GDAP1Q8TB36 358 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 ISCA1Q9BUE6 129 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 CAMSAP1Q5T5Y3 1602 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 IPO5O00410 1097 aaKnown RBP14.51□□□□□ -0.09
TRAF3-208ENST00000560371 SERPING1P05155 500 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 KRT3P12035 628 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 RECQLP46063 649 aaPredicted RBP14.51□□□□□ -0.09
TRAF3-208ENST00000560371 RBL2Q08999 1139 aa14.51□□□□□ -0.09
TRAF3-208ENST00000560371 TXNDC9O14530 226 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 NMT2O60551 498 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 QARSP47897 775 aaKnown RBP14.5□□□□□ -0.09
TRAF3-208ENST00000560371 BASP1P80723 227 aaKnown RBP14.5□□□□□ -0.09
TRAF3-208ENST00000560371 SLFNL1Q499Z3 407 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 NDUFAF2Q8N183 169 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 PPP1R12CQ9BZL4 782 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 RPAP3Q9H6T3 665 aaPredicted RBP14.5□□□□□ -0.09
TRAF3-208ENST00000560371 EFCAB8A8MWE9 144 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 THOC5Q13769 683 aaKnown RBP14.5□□□□□ -0.09
TRAF3-208ENST00000560371 VPS72Q15906 364 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 ADGRF4Q8IZF3 695 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 TNPO2O14787 897 aaKnown RBP14.5□□□□□ -0.09
TRAF3-208ENST00000560371 PAGE5Q96GU1 130 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 TTC25Q96NG3 672 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 PDE4DIPQ5VU43 2346 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 GPC4O75487 556 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 ZNF394Q53GI3 561 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 KSR1Q8IVT5 923 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 BEST2Q8NFU1 509 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 CHAMP1Q96JM3 812 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 NDST4Q9H3R1 872 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 THAP9Q9H5L6 903 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 ARHGAP42A6NI28 874 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 ZNF699Q32M78 642 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 DACT3Q96B18 629 aaPredicted RBP14.5□□□□□ -0.09
TRAF3-208ENST00000560371 PIDD1Q9HB75 910 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 GRIN3BO60391 1043 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 SWSAP1Q6NVH7 229 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 PADI6Q6TGC4 694 aa14.5□□□□□ -0.09
TRAF3-208ENST00000560371 CUL4AQ13619 759 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 STRIP1Q5VSL9 837 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 C2orf40Q9H1Z8 148 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 LRRD1A4D1F6 860 aa14.49□□□□□ -0.09
TRAF3-208ENST00000560371 POTEMA6NI47 508 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms