RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 LCTP09848 1927 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 PVALEFA0A1B0GWK0 134 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 GOLGA6L3A6NEY3 463 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 EML1O00423 815 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 BACH1O14867 736 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 SEPT4O43236 478 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 MED24O75448 989 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 SLITRK3O94933 977 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 SGPL1O95470 568 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 EYA4O95677 639 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 GGPS1O95749 300 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 INHAP05111 366 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 SSBP05455 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
SPG11-221ENST00000560299 KRT18P05783 430 aaKnown RBP7.17□□□□□ -1.26
SPG11-221ENST00000560299 SPATA31C1P0DKV0 1188 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 CYBAP13498 195 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 CYP2B6P20813 491 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 ACTR2P61160 394 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 MDM2Q00987 491 aaPredicted RBP7.17□□□□□ -1.26
SPG11-221ENST00000560299 CYP4A11Q02928 519 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 TYRO3Q06418 890 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 PNOCQ13519 176 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 STIM1Q13586 685 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 ACVR2BQ13705 512 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 LAMC2Q13753 1193 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 CTTNQ14247 550 aaKnown RBP7.17□□□□□ -1.26
SPG11-221ENST00000560299 DHX8Q14562 1220 aaKnown RBP7.17□□□□□ -1.26
SPG11-221ENST00000560299 NAALADL2Q58DX5 795 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 BRDTQ58F21 947 aaPredicted RBP7.17□□□□□ -1.26
SPG11-221ENST00000560299 NT5DC1Q5TFE4 455 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 C1orf53Q5VUE5 145 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 METTL7BQ6UX53 244 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 B3GNT9Q6UX72 402 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 CYFIP1Q7L576 1253 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 SH3RF1Q7Z6J0 888 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 FBXO16Q8IX29 292 aaPredicted RBP7.17□□□□□ -1.26
SPG11-221ENST00000560299 C4orf19Q8IY42 314 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 SEPT1Q8WYJ6 367 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 TRIB2Q92519 343 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 DYDC2Q96IM9 177 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 FGD4Q96M96 766 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 PNMA5Q96PV4 448 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 C7orf25Q9BPX7 421 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 LXNQ9BS40 222 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 AZI2Q9H6S1 392 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 KCND2Q9NZV8 630 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 TUBE1Q9UJT0 475 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 DDX41Q9UJV9 622 aaKnown RBP7.17□□□□□ -1.26
SPG11-221ENST00000560299 OGDHLQ9ULD0 1010 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 PCDHA5Q9Y5H7 936 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 ASTN1O14525 1302 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 LOXHD1Q8IVV2 1947 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 MCM3APO60318 1980 aa7.17□□□□□ -1.26
SPG11-221ENST00000560299 MYH9P35579 1960 aaKnown RBP7.17□□□□□ -1.26
SPG11-221ENST00000560299 RBM47A0AV96 593 aaKnown RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 ARHGEF35A5YM69 484 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 ECM2O94769 699 aaPredicted RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 FARP2O94887 1054 aaPredicted RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 ATG7O95352 703 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 LYPLA2O95372 231 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 SNAI1O95863 264 aaPredicted RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 GH1P01241 217 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 RPN1P04843 607 aaKnown RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 SUPT20HL2P0C7V6 817 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 PLA2G4BP0C869 781 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 UBA1P22314 1058 aaKnown RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 PPP1R2P41236 205 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 NLRP12P59046 1061 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 ASIC1P78348 528 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 SP4Q02446 784 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 DPYDQ12882 1025 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 PSMD2Q13200 908 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 MCM6Q14566 821 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 KCNB1Q14721 858 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 LY6KQ17RY6 165 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 CT47A1Q5JQC4 288 aaPredicted RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 CELF3Q5SZQ8 465 aaKnown RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 L1TD1Q5T7N2 865 aaKnown RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 SWSAP1Q6NVH7 229 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 CNNM4Q6P4Q7 775 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 CCDC62Q6P9F0 684 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 ABHD15Q6UXT9 468 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 CCDC65Q8IXS2 484 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 EXOC8Q8IYI6 725 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 SYT2Q8N9I0 419 aaPredicted RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 MLKLQ8NB16 471 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 NPLOC4Q8TAT6 608 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 SPATA20Q8TB22 786 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 FAM167AQ96KS9 214 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 ZNF302Q9NR11 478 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 NRBP2Q9NSY0 501 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 ANKEF1Q9NU02 776 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 BLOC1S4Q9NUP1 217 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 EXOC1Q9NV70 894 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 RGL1Q9NZL6 768 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 GABBR1Q9UBS5 961 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 KCNG1Q9UIX4 513 aa7.16□□□□□ -1.26
SPG11-221ENST00000560299 DBR1Q9UK59 544 aaKnown RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 ZHX1Q9UKY1 873 aaPredicted RBP7.16□□□□□ -1.26
SPG11-221ENST00000560299 PCDHB8Q9UN66 801 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms