RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 C8orf58Q8NAV2 365 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 BRF1Q92994 677 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 USP7Q93009 1102 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 MYCBPQ99417 103 aaPredicted RBP5.98□□□□□ -1.45
TPM1-222ENST00000560131 TTC1Q99614 292 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 BPIFA3Q9BQP9 254 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 UTP14AQ9BVJ6 771 aaKnown RBP5.98□□□□□ -1.45
TPM1-222ENST00000560131 LRRCC1Q9C099 1032 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 NKX2-4Q9H2Z4 354 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 CYP26B1Q9NR63 512 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 POLKQ9UBT6 870 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 SPEF1Q9Y4P9 236 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.98□□□□□ -1.45
TPM1-222ENST00000560131 SNX14Q9Y5W7 946 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 NPATQ14207 1427 aa5.98□□□□□ -1.45
TPM1-222ENST00000560131 FAM208AQ9UK61 1670 aaKnown RBP5.98□□□□□ -1.45
TPM1-222ENST00000560131 RGPD1P0DJD0 1748 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 MON2Q7Z3U7 1717 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 A0A1B0GUL7 405 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 BLACEA4D250 179 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 AKAP10O43572 662 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 MYO1BO43795 1136 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 KPNA6O60684 536 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 CAND2O75155 1236 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 WISP1O95388 367 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 TIAF1O95411 115 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 GNAI2P04899 355 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 APPP05067 770 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 SCG5P05408 212 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 GNAI3P08754 354 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 SKILP12757 684 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 IL13P35225 146 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 GNALP38405 381 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 MAGEA9P43362 315 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 TNNT3P45378 269 aaPredicted RBP5.97□□□□□ -1.45
TPM1-222ENST00000560131 SCNN1BP51168 640 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 AK2P54819 239 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 ATP8B2P98198 1209 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 GRB10Q13322 594 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 LRRC41Q15345 812 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 STX1AQ16623 288 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 ZSCAN26Q16670 478 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 ACAD11Q709F0 780 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 HDGFL2Q7Z4V5 671 aaPredicted RBP5.97□□□□□ -1.45
TPM1-222ENST00000560131 SRLQ86TD4 932 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 LUZP1Q86V48 1076 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 ANKLE2Q86XL3 938 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 SPATS2Q86XZ4 545 aaKnown RBP5.97□□□□□ -1.45
TPM1-222ENST00000560131 PASD1Q8IV76 773 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 CHPFQ8IZ52 775 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 ZNF622Q969S3 477 aaKnown RBP eCLIP5.97□□□□□ -1.45
TPM1-222ENST00000560131 MTMR8Q96EF0 704 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 WNK4Q96J92 1243 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 TACO1Q9BSH4 297 aaKnown RBP5.97□□□□□ -1.45
TPM1-222ENST00000560131 SSBP4Q9BWG4 385 aaPredicted RBP5.97□□□□□ -1.45
TPM1-222ENST00000560131 ASPNQ9BXN1 380 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 LSG1Q9H089 658 aaKnown RBP5.97□□□□□ -1.45
TPM1-222ENST00000560131 IFT22Q9H7X7 185 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 HYPKQ9NX55 129 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 PRR13Q9NZ81 148 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 ORC3Q9UBD5 711 aaPredicted RBP5.97□□□□□ -1.45
TPM1-222ENST00000560131 RSPH14Q9UHP6 348 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 DNAI1Q9UI46 699 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 SPATA31D1Q6ZQQ2 1576 aa5.97□□□□□ -1.45
TPM1-222ENST00000560131 LRRC37A3O60309 1634 aa5.96□□□□□ -1.45
TPM1-222ENST00000560131 MAP3K5Q99683 1374 aa5.96□□□□□ -1.45
TPM1-222ENST00000560131 E2F8A0AVK6 867 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 GOLGA6L9A6NEM1 432 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 ERICH4A6NGS2 130 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 CCDC69A6NI79 296 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 GOLGA6L19H0YKK7 550 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 AQP7O14520 342 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 TADA3O75528 432 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 SCGB1D2O95969 90 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 TUBBP07437 444 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 SNRPB2P08579 225 aaKnown RBP5.96□□□□□ -1.46
TPM1-222ENST00000560131 BPIP17213 487 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 GJB2P29033 226 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 ACTN2P35609 894 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 RHBDL3P58872 404 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 RAC1P63000 192 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 BIRC2Q13490 618 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 SNW1Q13573 536 aaKnown RBP5.96□□□□□ -1.46
TPM1-222ENST00000560131 HLTFQ14527 1009 aaKnown RBP eCLIP5.96□□□□□ -1.46
TPM1-222ENST00000560131 PPP2R5DQ14738 602 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 ANKRD1Q15327 319 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 MAP9Q49MG5 647 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 SLC35F1Q5T1Q4 408 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 LETMD1Q6P1Q0 360 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 CDH24Q86UP0 819 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 KIF18BQ86Y91 864 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 FMR1NBQ8N0W7 255 aaPredicted RBP5.96□□□□□ -1.46
TPM1-222ENST00000560131 MYO1HQ8N1T3 1032 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 TMEM145Q8NBT3 493 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 C2CD4AQ8NCU7 369 aaPredicted RBP5.96□□□□□ -1.46
TPM1-222ENST00000560131 OR2W6PQ8NHA6 318 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 PI4K2BQ8TCG2 481 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 DCAF4Q8WV16 495 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 RNF141Q8WVD5 230 aa5.96□□□□□ -1.46
TPM1-222ENST00000560131 RUFY2Q8WXA3 655 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms