RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GAP43P17677 238 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 SIX6OS1Q8N1H7 587 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 TFCP2L1Q9NZI6 479 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 STXBP3O00186 592 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 SEC31AO94979 1220 aaKnown RBP14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 PMS2P54278 862 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 TTC23LQ6PF05 361 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 DMAP1Q9NPF5 467 aaPredicted RBP14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 SEPT9Q9UHD8 586 aaPredicted RBP14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 MOSPD1Q9UJG1 213 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 CSADQ9Y600 493 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 MAP3K15Q6ZN16 1313 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 CTDSPL2Q05D32 466 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 KIAA1841Q6NSI8 718 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 BLIDQ8IZY5 108 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 DIAPH2O60879 1101 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 CC2D2BQ6DHV5 1058 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 RGL1Q9NZL6 768 aa14.81□□□□□ -0.04
CSPG4P12-202ENST00000559989 PFKFB1P16118 471 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 PARP9Q8IXQ6 854 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 SRPK1Q96SB4 655 aaKnown RBP14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 GOLPH3LQ9H4A5 285 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 GOLGA8JA6NMD2 632 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 CAV1Q03135 178 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 APOL6Q9BWW8 343 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 SNX14Q9Y5W7 946 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 ABCE1P61221 599 aaKnown RBP14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 HSPH1Q92598 858 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 TRIM63Q969Q1 353 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 HINFPQ9BQA5 517 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 STXBP2Q15833 593 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 PI4K2BQ8TCG2 481 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 TRIM54Q9BYV2 358 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 SUGCTQ9HAC7 445 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 FAM32AQ9Y421 112 aaKnown RBP14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 BIRC5O15392 142 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 PARP10Q53GL7 1025 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 BEND6Q5SZJ8 279 aaPredicted RBP14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 KCNV2Q8TDN2 545 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 FAM161BQ96MY7 647 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 MBD2Q9UBB5 411 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 WDR17Q8IZU2 1322 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 FOXO3O43524 673 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 GADD45BO75293 160 aaPredicted RBP14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 ARHGAP17Q68EM7 881 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 ARMCX2Q7L311 632 aa14.8□□□□□ -0.04
CSPG4P12-202ENST00000559989 TARSL2A2RTX5 802 aaKnown RBP14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 KRT38O76015 456 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 KLHL38Q2WGJ6 581 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 RASSF3Q86WH2 238 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 OLFML3Q9NRN5 406 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 PTPN23Q9H3S7 1636 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 SERPING1P05155 500 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 DEPDC7Q96QD5 511 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 SMARCAD1Q9H4L7 1026 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 SLC39A2Q9NP94 309 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 ARPP21Q9UBL0 812 aaPredicted RBP14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 CLCA2Q9UQC9 943 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 PCDHB15Q9Y5E8 787 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 CCDC22O60826 627 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 RECQLP46063 649 aaPredicted RBP14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 RAD23BP54727 409 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 ACCSQ96QU6 501 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 BRD8Q9H0E9 1235 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 PDCLQ13371 301 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 CEP95Q96GE4 821 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 ASAP2O43150 1006 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 ZMYND10O75800 440 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 TBC1D19Q8N5T2 526 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 SENP1Q9P0U3 644 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 LAD1O00515 517 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 ENC1O14682 589 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 SEC24DO94855 1032 aaPredicted RBP14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 ACSL3O95573 720 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 ARL4CP56559 192 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 RWDD4Q6NW29 188 aaKnown RBP14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 MIS18BP1Q6P0N0 1132 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 PPP1R14AQ96A00 147 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 MTERF3Q96E29 417 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 MSH6P52701 1360 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 RASA4BC9J798 803 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 RASA4O43374 803 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 SOX6P35712 828 aa14.79□□□□□ -0.04
CSPG4P12-202ENST00000559989 C5orf58C9J3I9 102 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 SF3B3Q15393 1217 aaKnown RBP14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 SURF1Q15526 300 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 POTEFA5A3E0 1075 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 CYTH3O43739 400 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 CYLC2Q14093 348 aaPredicted RBP14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 TSSK1BQ9BXA7 367 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 CYP26B1Q9NR63 512 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 DYTNA2CJ06 578 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 GOLGA8SH3BPF8 625 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 STX3Q13277 289 aa14.78□□□□□ -0.04
CSPG4P12-202ENST00000559989 E4F1Q66K89 784 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms