RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 NCAPH2Q6IBW4 605 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 DPP9Q86TI2 863 aa19.74■□□□□ 0.75
SNX1-208ENST00000559844 A0A1W2PQC6 194 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 POTEB3A0JP26 581 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 MFAP3LO75121 409 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 RPA1P27694 616 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 POTEBQ6S5H4 581 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 CCDC65Q8IXS2 484 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 FAM133AQ8N9E0 248 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 SOCS4Q8WXH5 440 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 DNAJC19Q96DA6 116 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 TAAR1Q96RJ0 339 aa19.73■□□□□ 0.75
SNX1-208ENST00000559844 GOLGA6L9A6NEM1 432 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 E9PMD0 336 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 MED24O75448 989 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 UBXN1Q04323 297 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 LRRC63Q05C16 580 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 COASYQ13057 564 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 MAP2K5Q13163 448 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 RMDN3Q96TC7 470 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 PANK4Q9NVE7 773 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 IGLV3-22A0A075B6J6 115 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 SSBP05455 408 aaKnown RBP eCLIP19.72■□□□□ 0.75
SNX1-208ENST00000559844 DNM2P50570 870 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 KIF18AQ8NI77 898 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 TSG101Q99816 390 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 GJD2Q9UKL4 321 aa19.72■□□□□ 0.75
SNX1-208ENST00000559844 RIOK3O14730 519 aaKnown RBP19.71■□□□□ 0.75
SNX1-208ENST00000559844 HSPA8P11142 646 aaKnown RBP19.71■□□□□ 0.75
SNX1-208ENST00000559844 PRKCZQ05513 592 aa19.71■□□□□ 0.75
SNX1-208ENST00000559844 GPBP1Q86WP2 473 aa19.71■□□□□ 0.75
SNX1-208ENST00000559844 CATSPER3Q86XQ3 398 aa19.71■□□□□ 0.75
SNX1-208ENST00000559844 CNOT6LQ96LI5 555 aaKnown RBP19.71■□□□□ 0.75
SNX1-208ENST00000559844 POLR3CQ9BUI4 534 aaPredicted RBP19.71■□□□□ 0.75
SNX1-208ENST00000559844 SEMA6BQ9H3T3 888 aa19.71■□□□□ 0.75
SNX1-208ENST00000559844 VAV3Q9UKW4 847 aa19.71■□□□□ 0.75
SNX1-208ENST00000559844 GABRQQ9UN88 632 aa19.71■□□□□ 0.75
SNX1-208ENST00000559844 DNM3Q9UQ16 869 aa19.71■□□□□ 0.75
SNX1-208ENST00000559844 ASTN1O14525 1302 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 SOWAHBA6NEL2 793 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 KIF20AO95235 890 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 GYPCP04921 128 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 EIF2AK2P19525 551 aaKnown RBP19.7■□□□□ 0.74
SNX1-208ENST00000559844 CYP2B6P20813 491 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 CASP14P31944 242 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 RGS2P41220 211 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 UBXN2AP68543 259 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 SETQ01105 290 aaPredicted RBP19.7■□□□□ 0.74
SNX1-208ENST00000559844 ARHGEF6Q15052 776 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 ZNF792Q3KQV3 632 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 FAM26FQ5R3K3 315 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 ARHGEF16Q5VV41 709 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 NSUN6Q8TEA1 469 aaKnown RBP19.7■□□□□ 0.74
SNX1-208ENST00000559844 CPLX3Q8WVH0 158 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 ZNF592Q92610 1267 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 USP6NLQ92738 828 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 HPS3Q969F9 1004 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 UIMC1Q96RL1 719 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 TUBGCP2Q9BSJ2 902 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 PXMP2Q9NR77 195 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 SLC5A4Q9NY91 659 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 PPP2R2CQ9Y2T4 447 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 CYP11B2P19099 503 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 FLT3LGP49771 235 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 ALDH5A1P51649 535 aaPredicted RBP19.7■□□□□ 0.74
SNX1-208ENST00000559844 SLC12A3P55017 1021 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 MYOCDQ8IZQ8 938 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 DNERQ8NFT8 737 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 ZNF507Q8TCN5 953 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 FGD4Q96M96 766 aa19.7■□□□□ 0.74
SNX1-208ENST00000559844 GNRH1P01148 92 aa19.69■□□□□ 0.74
SNX1-208ENST00000559844 PRKCSHP14314 528 aaPredicted RBP19.69■□□□□ 0.74
SNX1-208ENST00000559844 FECHP22830 423 aa19.69■□□□□ 0.74
SNX1-208ENST00000559844 HOXD10P28358 340 aa19.69■□□□□ 0.74
SNX1-208ENST00000559844 MTIF2P46199 727 aaKnown RBP19.69■□□□□ 0.74
SNX1-208ENST00000559844 NPLOC4Q8TAT6 608 aa19.69■□□□□ 0.74
SNX1-208ENST00000559844 APBA2Q99767 749 aa19.69■□□□□ 0.74
SNX1-208ENST00000559844 SRRDQ9UH36 339 aa19.69■□□□□ 0.74
SNX1-208ENST00000559844 LRRC37A2A6NM11 1700 aa19.69■□□□□ 0.74
SNX1-208ENST00000559844 RPTORQ8N122 1335 aa19.69■□□□□ 0.74
SNX1-208ENST00000559844 POTEFA5A3E0 1075 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 KRT18P05783 430 aaKnown RBP19.68■□□□□ 0.74
SNX1-208ENST00000559844 SPATA31C1P0DKV0 1188 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 CTCFP49711 727 aaPredicted RBP19.68■□□□□ 0.74
SNX1-208ENST00000559844 LBX1P52954 281 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 POTEGQ6S5H5 508 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 REXO1L1PQ8IX06 675 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 SYT2Q8N9I0 419 aaPredicted RBP19.68■□□□□ 0.74
SNX1-208ENST00000559844 CYP2W1Q8TAV3 490 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 SLC5A5Q92911 643 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 MAML3Q96JK9 1138 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 FRMPD4Q14CM0 1322 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 PES1O00541 588 aaKnown RBP19.68■□□□□ 0.74
SNX1-208ENST00000559844 HOXC6P09630 235 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 FXR1P51114 621 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNX1-208ENST00000559844 PPP2R5CQ13362 524 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 PGM5Q15124 567 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 CEP55Q53EZ4 464 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 LRCH2Q5VUJ6 765 aa19.68■□□□□ 0.74
SNX1-208ENST00000559844 IL31RAQ8NI17 732 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms