RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CTU1Q7Z7A3 348 aaKnown RBP11.65□□□□□ -0.54
TPM1-221ENST00000559831 TRIM50Q86XT4 487 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 ERCC4Q92889 916 aaPredicted RBP11.65□□□□□ -0.54
TPM1-221ENST00000559831 GLG1Q92896 1179 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 CCDC43Q96MW1 224 aaKnown RBP11.65□□□□□ -0.54
TPM1-221ENST00000559831 PCYT2Q99447 389 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 MAGEF1Q9HAY2 307 aa11.65□□□□□ -0.54
TPM1-221ENST00000559831 HOOK1Q9UJC3 728 aaKnown RBP11.65□□□□□ -0.54
TPM1-221ENST00000559831 EMSYQ7Z589 1322 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 IGKV6D-21A0A0A0MT36 114 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 ARHGEF35A5YM69 484 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 TMEM150BA6NC51 233 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 CTAGE5O15320 804 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 ZNF862O60290 1169 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 DUSP11O75319 330 aaKnown RBP11.64□□□□□ -0.55
TPM1-221ENST00000559831 LGR5O75473 907 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 EYA4O95677 639 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 MYCP01106 439 aaPredicted RBP11.64□□□□□ -0.55
TPM1-221ENST00000559831 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
TPM1-221ENST00000559831 LGALS2P05162 132 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 MYL3P08590 195 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 ZNF286BP0CG31 522 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 MARK3P27448 753 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 CASP1P29466 404 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 YWHABP31946 246 aaKnown RBP11.64□□□□□ -0.55
TPM1-221ENST00000559831 IRX5P78411 483 aaPredicted RBP11.64□□□□□ -0.55
TPM1-221ENST00000559831 BEX3Q00994 111 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 POSTNQ15063 836 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 SLC9C1Q4G0N8 1177 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 MAP3K21Q5TCX8 1036 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 PLA2G4FQ68DD2 849 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 GPBP1Q86WP2 473 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 C4orf19Q8IY42 314 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 BLZF1Q9H2G9 400 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 BHMT2Q9H2M3 363 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 HMX1Q9NP08 348 aaPredicted RBP11.64□□□□□ -0.55
TPM1-221ENST00000559831 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
TPM1-221ENST00000559831 Q9Y3F1 56 aa11.64□□□□□ -0.55
TPM1-221ENST00000559831 SYNRGQ9UMZ2 1314 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 MYADML2A6NDP7 307 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
TPM1-221ENST00000559831 LYPLA2O95372 231 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 PGK1P00558 417 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 OATP04181 439 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 KRT18P05783 430 aaKnown RBP11.63□□□□□ -0.55
TPM1-221ENST00000559831 C6orf222P0C671 652 aaPredicted RBP11.63□□□□□ -0.55
TPM1-221ENST00000559831 CPT1AP50416 773 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 SLC12A3P55017 1021 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 CHMP4BP1P59074 171 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 AMPD3Q01432 767 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 CUL4BQ13620 913 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 FSCN1Q16658 493 aaKnown RBP11.63□□□□□ -0.55
TPM1-221ENST00000559831 DGKDQ16760 1214 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 ZSCAN23Q3MJ62 389 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
TPM1-221ENST00000559831 XKR9Q5GH70 373 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 OTUD6AQ7L8S5 288 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 SH3RF1Q7Z6J0 888 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 KCTD17Q8N5Z5 321 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 AFAP1L1Q8TED9 768 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 MTRQ99707 1265 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 SH2D3AQ9BRG2 576 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 SMARCAD1Q9H4L7 1026 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 SPC25Q9HBM1 224 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 XPNPEP3Q9NQH7 507 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 KBTBD4Q9NVX7 518 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 DDX20Q9UHI6 824 aaKnown RBP11.63□□□□□ -0.55
TPM1-221ENST00000559831 TRPC6Q9Y210 931 aa11.63□□□□□ -0.55
TPM1-221ENST00000559831 MAFBQ9Y5Q3 323 aaPredicted RBP11.63□□□□□ -0.55
TPM1-221ENST00000559831 EVPLQ92817 2033 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 NPHP3-ACAD11A0A0J9YXS1 232 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 SYCE3A1L190 88 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 MYMKA6NI61 221 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 A6NJR5 290 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 PPFIA4O75335 1185 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 LETM1O95202 739 aaPredicted RBP11.62□□□□□ -0.55
TPM1-221ENST00000559831 SMC2O95347 1197 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 ATP4AP20648 1035 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 NPEPPSP55786 919 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 GJA9P57773 515 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 ASIC1P78348 528 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 MDM2Q00987 491 aaPredicted RBP11.62□□□□□ -0.55
TPM1-221ENST00000559831 RAD51AP2Q09MP3 1159 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 PLCB4Q15147 1175 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 MTERF2Q49AM1 385 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 XKR3Q5GH77 459 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 DYMQ7RTS9 669 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 PLPPR4Q7Z2D5 763 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 ELOA2Q8IYF1 753 aaPredicted RBP11.62□□□□□ -0.55
TPM1-221ENST00000559831 SYT2Q8N9I0 419 aaPredicted RBP11.62□□□□□ -0.55
TPM1-221ENST00000559831 SMARCE1Q969G3 411 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 FAM167AQ96KS9 214 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 CEP170P1Q96L14 293 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 RUSC1Q9BVN2 902 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 LRRC27Q9C0I9 530 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 UPF3AQ9H1J1 476 aaKnown RBP11.62□□□□□ -0.55
TPM1-221ENST00000559831 NRBP2Q9NSY0 501 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 BMP2KQ9NSY1 1161 aaPredicted RBP11.62□□□□□ -0.55
TPM1-221ENST00000559831 ANKEF1Q9NU02 776 aa11.62□□□□□ -0.55
TPM1-221ENST00000559831 DBR1Q9UK59 544 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms