RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 FBXL16Q8N461 479 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 CLP1Q92989 425 aaKnown RBP21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 LENG9Q96B70 501 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 ZMYND12Q9H0C1 365 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 TMX1Q9H3N1 280 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 C11orf16Q9NQ32 467 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 PCDHA2Q9Y5H9 948 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 KDM3AQ9Y4C1 1321 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 ARID2Q68CP9 1835 aa21.43■■□□□ 1.02
CDC42BPB-206ENST00000559790 RRN3P2A6NIE6 340 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 CYP3A4P08684 503 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 TMEM62Q0P6H9 643 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 GPM6BQ13491 265 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 LEXMQ3ZCV2 418 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 JAKMIP3Q5VZ66 844 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 Q6ZUG5 572 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 BRF1Q92994 677 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 JAKMIP1Q96N16 626 aaKnown RBP21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 UIMC1Q96RL1 719 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 SDF4Q9BRK5 362 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 EPHX3Q9H6B9 360 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 TRPV2Q9Y5S1 764 aa21.42■■□□□ 1.02
CDC42BPB-206ENST00000559790 DDX39AO00148 427 aaKnown RBP21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 DGKIO75912 1065 aa21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 METAP2P50579 478 aaKnown RBP eCLIP21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 STAT5BP51692 787 aa21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 CAMK1Q14012 370 aa21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 TCEAL5Q5H9L2 206 aa21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 NEK9Q8TD19 979 aa21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 TMEM40Q8WWA1 233 aa21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 IL17RAQ96F46 866 aa21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 TRPC6Q9Y210 931 aa21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 SQORQ9Y6N5 450 aa21.41■■□□□ 1.02
CDC42BPB-206ENST00000559790 SMIM35A0A1B0GVV1 85 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 GRM6O15303 877 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 MGEA5O60502 916 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 HMGB1P09429 215 aaKnown RBP21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 IL9P15248 144 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 KCNA5P22460 613 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 TIGD5Q53EQ6 642 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 MTHFD1LQ6UB35 978 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 RSPH3Q86UC2 560 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 PLA2G4DQ86XP0 818 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 RASGRP4Q8TDF6 673 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 PHKBQ93100 1093 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 CDHR5Q9HBB8 845 aa21.4■■□□□ 1.02
CDC42BPB-206ENST00000559790 ZNF318Q5VUA4 2279 aa21.39■■□□□ 1.02
CDC42BPB-206ENST00000559790 POTEB3A0JP26 581 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 PPFIA3O75145 1194 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 RPS6KB1P23443 525 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 CTNNB1P35222 781 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 LTBRP36941 435 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 GATMP50440 423 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 EVCP57679 992 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 POTEBQ6S5H4 581 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 BANK1Q8NDB2 785 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 ATP8B4Q8TF62 1192 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 AZI2Q9H6S1 392 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 PADI3Q9ULW8 664 aa21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 MRPL42Q9Y6G3 142 aaKnown RBP21.39■■□□□ 1.01
CDC42BPB-206ENST00000559790 PRPF3O43395 683 aaKnown RBP21.38■■□□□ 1.01
CDC42BPB-206ENST00000559790 BMPR1AP36894 532 aa21.38■■□□□ 1.01
CDC42BPB-206ENST00000559790 FAM178BQ8IXR5 827 aa21.38■■□□□ 1.01
CDC42BPB-206ENST00000559790 KIAA0319LQ8IZA0 1049 aa21.38■■□□□ 1.01
CDC42BPB-206ENST00000559790 FIBCD1Q8N539 461 aa21.38■■□□□ 1.01
CDC42BPB-206ENST00000559790 CELF4Q9BZC1 486 aaKnown RBP21.38■■□□□ 1.01
CDC42BPB-206ENST00000559790 ERVK-5Q9HDB9 667 aa21.38■■□□□ 1.01
CDC42BPB-206ENST00000559790 COL1A2P08123 1366 aa21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 IPO5O00410 1097 aaKnown RBP21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 C22orf31O95567 290 aa21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 DNAJB1P25685 340 aa21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 CIITAP33076 1130 aa21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 SLC26A2P50443 739 aa21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 TOB2Q14106 344 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 TMEM266Q2M3C6 531 aa21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 CTC1Q2NKJ3 1217 aa21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 REXO1Q8N1G1 1221 aaKnown RBP21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 GLT8D2Q9H1C3 349 aa21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 NSUN3Q9H649 340 aaKnown RBP21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 NCOA5Q9HCD5 579 aaKnown RBP21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 MUC6Q6W4X9 2439 aa21.37■■□□□ 1.01
CDC42BPB-206ENST00000559790 H3BQ06 376 aaPredicted RBP21.36■■□□□ 1.01
CDC42BPB-206ENST00000559790 RPLP2P05387 115 aaKnown RBP21.36■■□□□ 1.01
CDC42BPB-206ENST00000559790 KLRC1P26715 233 aa21.36■■□□□ 1.01
CDC42BPB-206ENST00000559790 PTPROQ16827 1216 aa21.36■■□□□ 1.01
CDC42BPB-206ENST00000559790 IER5Q5VY09 327 aa21.36■■□□□ 1.01
CDC42BPB-206ENST00000559790 BLOC1S2Q6QNY1 142 aa21.36■■□□□ 1.01
CDC42BPB-206ENST00000559790 LINC01465Q8N7H1 131 aa21.36■■□□□ 1.01
CDC42BPB-206ENST00000559790 PABPC5Q96DU9 382 aaKnown RBP21.36■■□□□ 1.01
CDC42BPB-206ENST00000559790 MAFBQ9Y5Q3 323 aaPredicted RBP21.36■■□□□ 1.01
CDC42BPB-206ENST00000559790 GRXCR2A6NFK2 248 aa21.35■■□□□ 1.01
CDC42BPB-206ENST00000559790 HBP1O60381 514 aa21.35■■□□□ 1.01
CDC42BPB-206ENST00000559790 RB1P06400 928 aa21.35■■□□□ 1.01
CDC42BPB-206ENST00000559790 IFNAR1P17181 557 aa21.35■■□□□ 1.01
CDC42BPB-206ENST00000559790 GTF2F1P35269 517 aaKnown RBP eCLIP21.35■■□□□ 1.01
CDC42BPB-206ENST00000559790 DLX2Q07687 328 aaPredicted RBP21.35■■□□□ 1.01
CDC42BPB-206ENST00000559790 HYAL1Q12794 435 aa21.35■■□□□ 1.01
CDC42BPB-206ENST00000559790 NPY5RQ15761 445 aa21.35■■□□□ 1.01
CDC42BPB-206ENST00000559790 NPAS4Q8IUM7 802 aa21.35■■□□□ 1.01
CDC42BPB-206ENST00000559790 CMTR2Q8IYT2 770 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms