RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ATP4AP20648 1035 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 YWHABP31946 246 aaKnown RBP19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 NPEPPSP55786 919 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 EHHADHQ08426 723 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 COASYQ13057 564 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 GIT2Q14161 759 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 NEDD9Q14511 834 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 KCNB1Q14721 858 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 KLHL10Q6JEL2 608 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 CNNM4Q6P4Q7 775 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 UNC13DQ70J99 1090 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 ANO5Q75V66 913 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 SCFD2Q8WU76 684 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 NACC1Q96RE7 527 aa19.3■□□□□ 0.68
CHRNA3-206ENST00000559658 ATG7O95352 703 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 PSAPP07602 524 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 DEKP35659 375 aaKnown RBP19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 RARRES1P49788 294 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 PRKCEQ02156 737 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 ARHGAP1Q07960 439 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 TTLL4Q14679 1199 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 NCAPHQ15003 741 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 ZNF658Q5TYW1 1059 aaPredicted RBP19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 C1orf186Q6ZWK4 172 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 RDM1Q8NG50 284 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 GPR20Q99678 358 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 APBA2Q99767 749 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 MLXIPQ9HAP2 919 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 SLC39A2Q9NP94 309 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 EXOC1Q9NV70 894 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 TBC1D7Q9P0N9 293 aa19.29■□□□□ 0.68
CHRNA3-206ENST00000559658 LYPLA2O95372 231 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 MUTP22033 750 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 TCF7P36402 384 aaPredicted RBP19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 PRCPP42785 496 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 ACVR2BQ13705 512 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 C4orf19Q8IY42 314 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 HSD3B7Q9H2F3 369 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 MYH11P35749 1972 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 IGKV6D-21A0A0A0MT36 114 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 RBM47A0AV96 593 aaKnown RBP19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 IGHA2P01877 340 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 SMPD1P17405 629 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 RGS2P41220 211 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 FCGRTP55899 365 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 STX17P56962 302 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 PRKCZQ05513 592 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 CCDC144BQ3MJ40 725 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 MIS18BP1Q6P0N0 1132 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 GIMAP8Q8ND71 665 aaPredicted RBP19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 SOCS4Q8WXH5 440 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 SPATA33Q96N06 139 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 RMND1Q9NWS8 449 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 CTNND2Q9UQB3 1225 aa19.28■□□□□ 0.68
CHRNA3-206ENST00000559658 FRMD3A2A2Y4 597 aa19.27■□□□□ 0.68
CHRNA3-206ENST00000559658 SFI1A8K8P3 1242 aa19.27■□□□□ 0.68
CHRNA3-206ENST00000559658 KRT18P05783 430 aaKnown RBP19.27■□□□□ 0.68
CHRNA3-206ENST00000559658 MAEAQ7L5Y9 396 aa19.27■□□□□ 0.68
CHRNA3-206ENST00000559658 DHX37Q8IY37 1157 aaKnown RBP19.27■□□□□ 0.68
CHRNA3-206ENST00000559658 MLKLQ8NB16 471 aa19.27■□□□□ 0.68
CHRNA3-206ENST00000559658 ZHX3Q9H4I2 956 aa19.27■□□□□ 0.68
CHRNA3-206ENST00000559658 ZNF302Q9NR11 478 aa19.27■□□□□ 0.68
CHRNA3-206ENST00000559658 PANK4Q9NVE7 773 aa19.27■□□□□ 0.68
CHRNA3-206ENST00000559658 ARHGEF35A5YM69 484 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 USO1O60763 962 aaKnown RBP19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 MAP2K2P36507 400 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 PMS1P54277 932 aaKnown RBP19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 IRX5P78411 483 aaPredicted RBP19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 LRRC41Q15345 812 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 KCNV1Q6PIU1 500 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 PADI6Q6TGC4 694 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 TRIB2Q92519 343 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 BPIFA3Q9BQP9 254 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 ABHD16BQ9H3Z7 469 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 PCDHA2Q9Y5H9 948 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 MAFBQ9Y5Q3 323 aaPredicted RBP19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 PVALEFA0A1B0GWK0 134 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 TRIM49BA6NDI0 452 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 ZNF865P0CJ78 1059 aaPredicted RBP19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 FLT3LGP49771 235 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 CASP5P51878 434 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 MAPK7Q13164 816 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 HSP90AA4PQ58FG1 418 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 SFR1Q86XK3 245 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 DAW1Q8N136 415 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 ATP6V0A1Q93050 837 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 NAT10Q9H0A0 1025 aaKnown RBP19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 SLC5A4Q9NY91 659 aa19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 SEPT9Q9UHD8 586 aaPredicted RBP19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 DBR1Q9UK59 544 aaKnown RBP19.26■□□□□ 0.67
CHRNA3-206ENST00000559658 MARK3P27448 753 aa19.25■□□□□ 0.67
CHRNA3-206ENST00000559658 SOX10P56693 466 aa19.25■□□□□ 0.67
CHRNA3-206ENST00000559658 SP3Q02447 781 aa19.25■□□□□ 0.67
CHRNA3-206ENST00000559658 TRIM32Q13049 653 aa19.25■□□□□ 0.67
CHRNA3-206ENST00000559658 OLFML2BQ68BL8 750 aa19.25■□□□□ 0.67
CHRNA3-206ENST00000559658 ADSSL1Q8N142 457 aa19.25■□□□□ 0.67
CHRNA3-206ENST00000559658 CD99L2Q8TCZ2 262 aa19.25■□□□□ 0.67
CHRNA3-206ENST00000559658 SEPT1Q8WYJ6 367 aa19.25■□□□□ 0.67
CHRNA3-206ENST00000559658 GPRC5CQ9NQ84 441 aa19.25■□□□□ 0.67
CHRNA3-206ENST00000559658 TSKSQ9UJT2 592 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms