RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CYP3A7P24462 503 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 PLCB4Q15147 1175 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 ZNF484Q5JVG2 852 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 ODR4Q5SWX8 454 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 RASIP1Q5U651 963 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 KRT40Q6A162 431 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 CNKSR3Q6P9H4 555 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 ABHD15Q6UXT9 468 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 FAM43BQ6ZT52 329 aaPredicted RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 TRMT1LQ7Z2T5 733 aaKnown RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 CCDC60Q8IWA6 550 aaPredicted RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 CCDC83Q8IWF9 413 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 DIS3L2Q8IYB7 885 aaKnown RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 ZNF710Q8N1W2 664 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 USP38Q8NB14 1042 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 RDM1Q8NG50 284 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 ATP8B4Q8TF62 1192 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 SEPT8Q92599 483 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 DHX38Q92620 1227 aaKnown RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 APBB2Q92870 758 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 SLC5A5Q92911 643 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 LENG9Q96B70 501 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 FAM20AQ96MK3 541 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 FAM161BQ96MY7 647 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 UIMC1Q96RL1 719 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 CTAGE1Q96RT6 745 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 ZBED2Q9BTP6 218 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 IFIH1Q9BYX4 1025 aaKnown RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 NRBP2Q9NSY0 501 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 CXXC1Q9P0U4 656 aaPredicted RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 GABBR1Q9UBS5 961 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 PCDHA2Q9Y5H9 948 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 MAFBQ9Y5Q3 323 aaPredicted RBP4.93□□□□□ -1.62
SNX1-205ENST00000559339 SCN10AQ9Y5Y9 1956 aa4.93□□□□□ -1.62
SNX1-205ENST00000559339 LAMA2P24043 3122 aaKnown RBP4.92□□□□□ -1.62
SNX1-205ENST00000559339 COL1A2P08123 1366 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 KIAA1217Q5T5P2 1943 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 ALPK3Q96L96 1907 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 SMIM35A0A1B0GVV1 85 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 BTBD18B2RXH4 712 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 H3BQV1 296 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 ADAMTS3O15072 1205 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 TLL1O43897 1013 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 NEMFO60524 1076 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 NBNO60934 754 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 PSMD10O75832 226 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 KLRC1P26715 233 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 DNM2P50570 870 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 FOSBP53539 338 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 PSMC5P62195 406 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 ADAM17P78536 824 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 CDC42EP1Q00587 391 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 TBC1D8BQ0IIM8 1120 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 NR5A1Q13285 461 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 PPP2R5CQ13362 524 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 HIC1Q14526 733 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 NPY5RQ15761 445 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 CALCRLQ16602 461 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 TRIM71Q2Q1W2 868 aaKnown RBP4.92□□□□□ -1.62
SNX1-205ENST00000559339 MARCH8Q5T0T0 291 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 PPP2R2DQ66LE6 453 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 MTHFD1LQ6UB35 978 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 Q7L0L9 218 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 MIER3Q7Z3K6 550 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 EXOC8Q8IYI6 725 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 METTL13Q8N6R0 699 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 DBF4BQ8NFT6 615 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 FBXO18Q8NFZ0 1043 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 ETNPPLQ8TBG4 499 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 OXER1Q8TDS5 423 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 DNAJB3Q8WWF6 145 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 TBC1D32Q96NH3 1257 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 MAP7D2Q96T17 732 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 PCYT2Q99447 389 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 GAS2L1Q99501 681 aaPredicted RBP4.92□□□□□ -1.62
SNX1-205ENST00000559339 KIF2CQ99661 725 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 JPH2Q9BR39 696 aaPredicted RBP4.92□□□□□ -1.62
SNX1-205ENST00000559339 FTHL17Q9BXU8 183 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 PBX4Q9BYU1 374 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 FAM49AQ9H0Q0 323 aaPredicted RBP4.92□□□□□ -1.62
SNX1-205ENST00000559339 FOXP1Q9H334 677 aaPredicted RBP4.92□□□□□ -1.62
SNX1-205ENST00000559339 SEMA6BQ9H3T3 888 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 ZNF576Q9H609 170 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 GJB4Q9NTQ9 266 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 MTMR10Q9NXD2 777 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 NOL7Q9UMY1 257 aaKnown RBP4.92□□□□□ -1.62
SNX1-205ENST00000559339 PCDHA12Q9UN75 941 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 GINS2Q9Y248 185 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 TELO2Q9Y4R8 837 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 PCDHA11Q9Y5I1 949 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 GTF3C3Q9Y5Q9 886 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 SQORQ9Y6N5 450 aa4.92□□□□□ -1.62
SNX1-205ENST00000559339 DDX11L8A8MPP1 907 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 GRXCR1A8MXD5 290 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 GPR182O15218 404 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 SLC37A4O43826 429 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 GJB5O95377 273 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 CHRNA1P02708 482 aa4.91□□□□□ -1.62
SNX1-205ENST00000559339 OATP04181 439 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms