RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 PCDHGA7Q9Y5G6 932 aa14.63□□□□□ -0.07
CASC4-208ENST00000559151 PCDHGA6Q9Y5G7 932 aa14.63□□□□□ -0.07
CASC4-208ENST00000559151 PCDHGA3Q9Y5H0 932 aa14.63□□□□□ -0.07
CASC4-208ENST00000559151 PCDHGA2Q9Y5H1 932 aa14.63□□□□□ -0.07
CASC4-208ENST00000559151 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
CASC4-208ENST00000559151 TBX4P57082 545 aa14.62□□□□□ -0.07
CASC4-208ENST00000559151 SLC9A5Q14940 896 aa14.62□□□□□ -0.07
CASC4-208ENST00000559151 ODF1Q14990 250 aa14.62□□□□□ -0.07
CASC4-208ENST00000559151 PLEKHN1Q494U1 663 aaPredicted RBP14.62□□□□□ -0.07
CASC4-208ENST00000559151 C14orf80Q86SX3 495 aa14.62□□□□□ -0.07
CASC4-208ENST00000559151 KLHL14Q9P2G3 628 aa14.62□□□□□ -0.07
CASC4-208ENST00000559151 ADCY1Q08828 1119 aa14.61□□□□□ -0.07
CASC4-208ENST00000559151 RTN4RL1Q86UN2 441 aaPredicted RBP14.61□□□□□ -0.07
CASC4-208ENST00000559151 CXorf67Q86X51 503 aaPredicted RBP14.61□□□□□ -0.07
CASC4-208ENST00000559151 NME9Q86XW9 330 aa14.61□□□□□ -0.07
CASC4-208ENST00000559151 AMOTL1Q8IY63 956 aa14.61□□□□□ -0.07
CASC4-208ENST00000559151 HIPK4Q8NE63 616 aa14.61□□□□□ -0.07
CASC4-208ENST00000559151 FOXRED1Q96CU9 486 aaPredicted RBP14.61□□□□□ -0.07
CASC4-208ENST00000559151 DTLQ9NZJ0 730 aa14.61□□□□□ -0.07
CASC4-208ENST00000559151 USP36Q9P275 1121 aaKnown RBP14.61□□□□□ -0.07
CASC4-208ENST00000559151 PRPF3O43395 683 aaKnown RBP14.6□□□□□ -0.07
CASC4-208ENST00000559151 RFPL1O75677 317 aa14.6□□□□□ -0.07
CASC4-208ENST00000559151 RECQLP46063 649 aaPredicted RBP14.6□□□□□ -0.07
CASC4-208ENST00000559151 MAPKAPK2P49137 400 aa14.6□□□□□ -0.07
CASC4-208ENST00000559151 CLUL1Q15846 466 aa14.6□□□□□ -0.07
CASC4-208ENST00000559151 CILP2Q8IUL8 1156 aa14.6□□□□□ -0.07
CASC4-208ENST00000559151 C7orf31Q8N865 590 aa14.6□□□□□ -0.07
CASC4-208ENST00000559151 ACAP3Q96P50 834 aa14.6□□□□□ -0.07
CASC4-208ENST00000559151 XPOTO43592 962 aaKnown RBP14.59□□□□□ -0.07
CASC4-208ENST00000559151 ADAM23O75077 832 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 CLEC2LP0C7M8 214 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 ATF3P18847 181 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 AOAHP28039 575 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 KRT85P78386 507 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 FAM102BQ5T8I3 360 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 PHYKPLQ8IUZ5 450 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 CPA6Q8N4T0 437 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 ANO3Q9BYT9 981 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 POFUT1Q9H488 388 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 GEMIN8Q9NWZ8 242 aaKnown RBP14.59□□□□□ -0.07
CASC4-208ENST00000559151 BTBD7Q9P203 1132 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 ASB1Q9Y576 335 aa14.59□□□□□ -0.07
CASC4-208ENST00000559151 UBA6A0AVT1 1052 aaPredicted RBP14.58□□□□□ -0.08
CASC4-208ENST00000559151 PRC1O43663 620 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 CT47B1P0C2W7 299 aaPredicted RBP14.58□□□□□ -0.08
CASC4-208ENST00000559151 MC4RP32245 332 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 PDE6BP35913 854 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 DBPQ10586 325 aaPredicted RBP14.58□□□□□ -0.08
CASC4-208ENST00000559151 LRP8Q14114 963 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 TMEM240Q5SV17 173 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 ZMYM1Q5SVZ6 1142 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 MIB1Q86YT6 1006 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 FAM126BQ8IXS8 530 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 TCEAL8Q8IYN2 117 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 ORAI2Q96SN7 254 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 PLA2G2DQ9UNK4 145 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 PPP2R3BQ9Y5P8 575 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 MRFAP1Q9Y605 127 aa14.58□□□□□ -0.08
CASC4-208ENST00000559151 PRAMEF22A3QJZ6 481 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 GOLGA6L22H0YM25 854 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 HYAL3O43820 417 aaPredicted RBP14.57□□□□□ -0.08
CASC4-208ENST00000559151 LRG1P02750 347 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 MANFP55145 182 aaKnown RBP14.57□□□□□ -0.08
CASC4-208ENST00000559151 MOGSQ13724 837 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 MLC1Q15049 377 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 CT83Q5H943 113 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 PRAMEF18Q5VWM3 479 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 ZC3H14Q6PJT7 736 aaKnown RBP14.57□□□□□ -0.08
CASC4-208ENST00000559151 RELTQ969Z4 430 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 TOE1Q96GM8 510 aaKnown RBP14.57□□□□□ -0.08
CASC4-208ENST00000559151 SLC6A17Q9H1V8 727 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 TCF7L1Q9HCS4 588 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 SLC52A1Q9NWF4 448 aa14.57□□□□□ -0.08
CASC4-208ENST00000559151 OR14I1A6ND48 311 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 ELL2O00472 640 aaPredicted RBP14.56□□□□□ -0.08
CASC4-208ENST00000559151 PF4V1P10720 104 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 STAT5AP42229 794 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 ZBTB41Q5SVQ8 909 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 CD276Q5ZPR3 534 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 NXNQ6DKJ4 435 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 TTLL7Q6ZT98 887 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 ESPNLQ6ZVH7 1005 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 TPH2Q8IWU9 490 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 TTC8Q8TAM2 541 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 ALG3Q92685 438 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 TUBGCP5Q96RT8 1024 aa14.56□□□□□ -0.08
CASC4-208ENST00000559151 ENPP1P22413 925 aa14.55□□□□□ -0.08
CASC4-208ENST00000559151 THBS2P35442 1172 aa14.55□□□□□ -0.08
CASC4-208ENST00000559151 ACAP2Q15057 778 aa14.55□□□□□ -0.08
CASC4-208ENST00000559151 FSCN1Q16658 493 aaKnown RBP14.55□□□□□ -0.08
CASC4-208ENST00000559151 MYL10Q9BUA6 226 aa14.55□□□□□ -0.08
CASC4-208ENST00000559151 QRSL1Q9H0R6 528 aaKnown RBP14.55□□□□□ -0.08
CASC4-208ENST00000559151 UCKL1Q9NWZ5 548 aa14.55□□□□□ -0.08
CASC4-208ENST00000559151 DNAJC28Q9NX36 388 aa14.55□□□□□ -0.08
CASC4-208ENST00000559151 KLHL33A6NCF5 533 aa14.54□□□□□ -0.08
CASC4-208ENST00000559151 SRSF2Q01130 221 aaKnown RBP14.54□□□□□ -0.08
CASC4-208ENST00000559151 TCIRG1Q13488 830 aa14.54□□□□□ -0.08
CASC4-208ENST00000559151 TTC38Q5R3I4 469 aa14.54□□□□□ -0.08
CASC4-208ENST00000559151 TEPPQ6URK8 271 aa14.54□□□□□ -0.08
CASC4-208ENST00000559151 AMIGO3Q86WK7 504 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms