RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 CTSHP09668 335 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 HOXB3P14651 431 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-205ENST00000558700 ITGB5P18084 799 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 POU3F3P20264 500 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-205ENST00000558700 GCGRP47871 477 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 ARHGAP4P98171 946 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 EXOSC10Q01780 885 aaKnown RBP9.21□□□□□ -0.94
TRAF3-205ENST00000558700 AAK1Q2M2I8 961 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 TSGA10IPQ3SY00 556 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 PLEKHG4Q58EX7 1191 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 TAF2Q6P1X5 1199 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 SKAP1Q86WV1 359 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 MYOCDQ8IZQ8 938 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 DBF4BQ8NFT6 615 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 APBB2Q92870 758 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 TCEANC2Q96MN5 208 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 ASB2Q96Q27 587 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 TGS1Q96RS0 853 aaKnown RBP9.21□□□□□ -0.94
TRAF3-205ENST00000558700 RAD9AQ99638 391 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 GZF1Q9H116 711 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-205ENST00000558700 RNPEPQ9H4A4 650 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 BCAS3Q9H6U6 928 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 JPH1Q9HDC5 661 aaPredicted RBP9.21□□□□□ -0.94
TRAF3-205ENST00000558700 RIC8AQ9NPQ8 531 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 JADE2Q9NQC1 790 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 SETD4Q9NVD3 440 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 ERAP1Q9NZ08 941 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 PKD2L1Q9P0L9 805 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 PCDHA6Q9UN73 950 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 PCDHA8Q9Y5H6 950 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 NID2Q14112 1375 aa9.21□□□□□ -0.94
TRAF3-205ENST00000558700 PRRC2BQ5JSZ5 2229 aaKnown RBP9.2□□□□□ -0.94
TRAF3-205ENST00000558700 TTC28Q96AY4 2481 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 CCDC196A0A1B0GTZ2 297 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 LCHNA4D1U4 455 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 LINC01553A4QN01 128 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 EPOPA6NHQ4 379 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 REC8O95072 547 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 METAP2P50579 478 aaKnown RBP eCLIP9.2□□□□□ -0.94
TRAF3-205ENST00000558700 FUT2Q10981 343 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 PPFIA1Q13136 1202 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 TCTN1Q2MV58 587 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 ADCK5Q3MIX3 580 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 FAM117BQ6P1L5 589 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 TMCO2Q7Z6W1 182 aaPredicted RBP9.2□□□□□ -0.94
TRAF3-205ENST00000558700 RSPH3Q86UC2 560 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 GDPD5Q8WTR4 605 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 CCDC12Q8WUD4 166 aaPredicted RBP9.2□□□□□ -0.94
TRAF3-205ENST00000558700 SEPT1Q8WYJ6 367 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 TSC1Q92574 1164 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 GLG1Q92896 1179 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 MXRA8Q9BRK3 442 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 SDF4Q9BRK5 362 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 SMARCAD1Q9H4L7 1026 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 AZI2Q9H6S1 392 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 BARHL2Q9NY43 387 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 TUBE1Q9UJT0 475 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 NAP1L2Q9ULW6 460 aaPredicted RBP9.2□□□□□ -0.94
TRAF3-205ENST00000558700 INSL6Q9Y581 213 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 MTCH2Q9Y6C9 303 aa9.2□□□□□ -0.94
TRAF3-205ENST00000558700 STXBP3O00186 592 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 TNFRSF10AO00220 468 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 RFXAPO00287 272 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 ATP9AO75110 1047 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 MARK3P27448 753 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 SREBF1P36956 1147 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 ERVK-21P61565 698 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 ADAM17P78536 824 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 GRB10Q13322 594 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 GRIK4Q16099 956 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 FAM26DQ5JW98 314 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 BLOC1S2Q6QNY1 142 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 RPAINQ86UA6 219 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 ADAMTS19Q8TE59 1207 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 TNPO1Q92973 898 aaKnown RBP9.19□□□□□ -0.94
TRAF3-205ENST00000558700 CCDC136Q96JN2 1154 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 JAKMIP1Q96N16 626 aaKnown RBP9.19□□□□□ -0.94
TRAF3-205ENST00000558700 SAMD11Q96NU1 681 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 YME1L1Q96TA2 773 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 IFIH1Q9BYX4 1025 aaKnown RBP9.19□□□□□ -0.94
TRAF3-205ENST00000558700 KCNH7Q9NS40 1196 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 SLC9A2Q9UBY0 812 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 MTUS1Q9ULD2 1270 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 BRPF3Q9ULD4 1205 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 COG5Q9UP83 839 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 NFASCO94856 1347 aa9.19□□□□□ -0.94
TRAF3-205ENST00000558700 GSTTP1A0A1W2PQM5 241 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 ESYT2A0FGR8 921 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 SMCO2A6NFE2 343 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 RRN3P2A6NIE6 340 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 SMAPO00193 183 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 GHRP10912 638 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 SCG2P13521 617 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 RFX1P22670 979 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 PSMA5P28066 241 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 HSPA4P34932 840 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 ZNF76P36508 570 aa9.18□□□□□ -0.94
TRAF3-205ENST00000558700 HTRA4P83105 476 aaPredicted RBP9.18□□□□□ -0.94
TRAF3-205ENST00000558700 PFKFB3Q16875 520 aaPredicted RBP9.18□□□□□ -0.94
TRAF3-205ENST00000558700 CEP55Q53EZ4 464 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms