RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 MAGEB6Q8N7X4 407 aa9.05□□□□□ -0.96
PSMA4-208ENST00000558639 MIGA1Q8NAN2 632 aa9.05□□□□□ -0.96
PSMA4-208ENST00000558639 SSH3Q8TE77 659 aa9.05□□□□□ -0.96
PSMA4-208ENST00000558639 PAWRQ96IZ0 340 aaKnown RBP9.05□□□□□ -0.96
PSMA4-208ENST00000558639 DNAJC2Q99543 621 aaKnown RBP9.05□□□□□ -0.96
PSMA4-208ENST00000558639 PIH1D3Q9NQM4 214 aaKnown RBP9.05□□□□□ -0.96
PSMA4-208ENST00000558639 PPT2Q9UMR5 302 aa9.05□□□□□ -0.96
PSMA4-208ENST00000558639 CNTNAP5Q8WYK1 1306 aa9.05□□□□□ -0.96
PSMA4-208ENST00000558639 RBBP6Q7Z6E9 1792 aaKnown RBP9.04□□□□□ -0.96
PSMA4-208ENST00000558639 DOCK2Q92608 1830 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 C19orf81C9J6K1 198 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 GFRA2O00451 464 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 WISP1O95388 367 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 CDK8P49336 464 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 JAG1P78504 1218 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 ID3Q02535 119 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 PDE4BQ07343 736 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 ZYXQ15942 572 aaKnown RBP9.04□□□□□ -0.96
PSMA4-208ENST00000558639 ERICH6BQ5W0A0 696 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 CKAP2LQ8IYA6 745 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 GPRC5AQ8NFJ5 357 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 EAF2Q96CJ1 260 aaPredicted RBP9.04□□□□□ -0.96
PSMA4-208ENST00000558639 ANAPC16Q96DE5 110 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 SCARF2Q96GP6 870 aaPredicted RBP9.04□□□□□ -0.96
PSMA4-208ENST00000558639 PAGR1Q9BTK6 254 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 TMPRSS13Q9BYE2 586 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 TACC3Q9Y6A5 838 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 MGAMO43451 1857 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 FLT1P17948 1338 aa9.04□□□□□ -0.96
PSMA4-208ENST00000558639 RFX7Q2KHR2 1363 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 PRAMEF27A3QJZ7 478 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 SPATA31C1P0DKV0 1188 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 MAP3K12Q12852 859 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 RAB3GAP1Q15042 981 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 SHROOM1Q2M3G4 852 aaPredicted RBP9.03□□□□□ -0.96
PSMA4-208ENST00000558639 ZC3H12AQ5D1E8 599 aaKnown RBP9.03□□□□□ -0.96
PSMA4-208ENST00000558639 WDR78Q5VTH9 848 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 FDX2Q6P4F2 183 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 CCDC81Q6ZN84 652 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 KIAA1211Q6ZU35 1233 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 NECAB2Q7Z6G3 386 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 AACSQ86V21 672 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 C12orf40Q86WS4 652 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.03□□□□□ -0.96
PSMA4-208ENST00000558639 ANTXR1Q9H6X2 564 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 EHMT1Q9H9B1 1298 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 SUGCTQ9HAC7 445 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 IL1RAPL2Q9NP60 686 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 CABP5Q9NP86 173 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 STAP2Q9UGK3 403 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 DBNLQ9UJU6 430 aaKnown RBP9.03□□□□□ -0.96
PSMA4-208ENST00000558639 GJD2Q9UKL4 321 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 EXOC6BQ9Y2D4 811 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 R3HCC1Q9Y3T6 440 aaKnown RBP9.03□□□□□ -0.96
PSMA4-208ENST00000558639 MRVI1Q9Y6F6 885 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 RPTORQ8N122 1335 aa9.03□□□□□ -0.96
PSMA4-208ENST00000558639 DOCK1Q14185 1865 aa9.02□□□□□ -0.96
PSMA4-208ENST00000558639 ATE1O95260 518 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 GH2P01242 217 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 HMGCRP04035 888 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 HOXA7P31268 230 aaPredicted RBP9.02□□□□□ -0.97
PSMA4-208ENST00000558639 HERVK_113P62684 666 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 ERVK-24P63145 666 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 CLCQ05315 142 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 RBL2Q08999 1139 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 LRRFIP1Q32MZ4 808 aaKnown RBP9.02□□□□□ -0.97
PSMA4-208ENST00000558639 CERKLQ49MI3 558 aaPredicted RBP9.02□□□□□ -0.97
PSMA4-208ENST00000558639 CYFIP1Q7L576 1253 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.02□□□□□ -0.97
PSMA4-208ENST00000558639 TTC6Q86TZ1 520 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 SMG8Q8ND04 991 aaKnown RBP9.02□□□□□ -0.97
PSMA4-208ENST00000558639 PANK1Q8TE04 598 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 ZNF512BQ96KM6 892 aaPredicted RBP9.02□□□□□ -0.97
PSMA4-208ENST00000558639 NACC1Q96RE7 527 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 FEZ1Q99689 392 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 RBPJLQ9UBG7 517 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 ZBTB21Q9ULJ3 1066 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 AP4E1Q9UPM8 1137 aa9.02□□□□□ -0.97
PSMA4-208ENST00000558639 NOP58Q9Y2X3 529 aaKnown RBP9.02□□□□□ -0.97
PSMA4-208ENST00000558639 POLR3KQ9Y2Y1 108 aaPredicted RBP9.02□□□□□ -0.97
PSMA4-208ENST00000558639 MPHOSPH10O00566 681 aaKnown RBP9.01□□□□□ -0.97
PSMA4-208ENST00000558639 HMMRO75330 724 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 CAPN2P17655 700 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 GRIK4Q16099 956 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 ABCB5Q2M3G0 1257 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 UBE2Q1Q7Z7E8 422 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 C7orf61Q8IZ16 206 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 DOCK3Q8IZD9 2030 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 TMEM130Q8N3G9 435 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 C12orf50Q8NA57 414 aaPredicted RBP9.01□□□□□ -0.97
PSMA4-208ENST00000558639 OR6P1Q8NGX9 317 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 DIS3LQ8TF46 1054 aaKnown RBP9.01□□□□□ -0.97
PSMA4-208ENST00000558639 ATXN3LQ9H3M9 355 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 DNAJC18Q9H819 358 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 TXNRD2Q9NNW7 524 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 PAK6Q9NQU5 681 aaPredicted RBP9.01□□□□□ -0.97
PSMA4-208ENST00000558639 SERPINB13Q9UIV8 391 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 ZMYND8Q9ULU4 1186 aaPredicted RBP9.01□□□□□ -0.97
PSMA4-208ENST00000558639 HIF3AQ9Y2N7 669 aa9.01□□□□□ -0.97
PSMA4-208ENST00000558639 PHIPQ8WWQ0 1821 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms