RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 TRIM71Q2Q1W2 868 aaKnown RBP13.9□□□□□ -0.18
SMAD3-205ENST00000558428 TRAPPC12Q8WVT3 735 aa13.9□□□□□ -0.18
SMAD3-205ENST00000558428 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-205ENST00000558428 FAM167AQ96KS9 214 aa13.9□□□□□ -0.18
SMAD3-205ENST00000558428 TTC12Q9H892 705 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-205ENST00000558428 PCDHA12Q9UN75 941 aa13.9□□□□□ -0.18
SMAD3-205ENST00000558428 LAMA2P24043 3122 aaKnown RBP13.9□□□□□ -0.18
SMAD3-205ENST00000558428 MBLAC1A4D2B0 266 aaPredicted RBP13.89□□□□□ -0.19
SMAD3-205ENST00000558428 ZNF862O60290 1169 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 OATP04181 439 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 OR52Z1P0C646 297 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 ACRP10323 421 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 SELPP16109 830 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 SYT1P21579 422 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 THPOP40225 353 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 EPHB4P54760 987 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 SPIRE1Q08AE8 756 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 EPHA7Q15375 998 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 RILPL1Q5EBL4 403 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 ZNF484Q5JVG2 852 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 MARCH8Q5T0T0 291 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 ZNF618Q5T7W0 954 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 TAF2Q6P1X5 1199 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 RUFY4Q6ZNE9 571 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 LRRC8DQ7L1W4 858 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 TDHQ8IZJ6 230 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 BANK1Q8NDB2 785 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 ZBTB10Q96DT7 871 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 IL23AQ9NPF7 189 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 NRBP2Q9NSY0 501 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 PCDHB6Q9Y5E3 794 aa13.89□□□□□ -0.19
SMAD3-205ENST00000558428 COL1A2P08123 1366 aa13.88□□□□□ -0.19
SMAD3-205ENST00000558428 A0A1W2PPC1 479 aa13.88□□□□□ -0.19
SMAD3-205ENST00000558428 P4HBP07237 508 aaKnown RBP13.88□□□□□ -0.19
SMAD3-205ENST00000558428 PSMC5P62195 406 aa13.88□□□□□ -0.19
SMAD3-205ENST00000558428 SHHQ15465 462 aa13.88□□□□□ -0.19
SMAD3-205ENST00000558428 C9orf50Q5SZB4 431 aa13.88□□□□□ -0.19
SMAD3-205ENST00000558428 DEFB128Q7Z7B8 93 aa13.88□□□□□ -0.19
SMAD3-205ENST00000558428 FERMT3Q86UX7 667 aa13.88□□□□□ -0.19
SMAD3-205ENST00000558428 RPUSD2Q8IZ73 545 aaKnown RBP13.88□□□□□ -0.19
SMAD3-205ENST00000558428 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
SMAD3-205ENST00000558428 POTEMA6NI47 508 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 DKC1O60832 514 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMAD3-205ENST00000558428 CAND2O75155 1236 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 CTSHP09668 335 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 KLRC1P26715 233 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 RFC2P35250 354 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 QARSP47897 775 aaKnown RBP13.87□□□□□ -0.19
SMAD3-205ENST00000558428 PTGDRQ13258 359 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 TMEM266Q2M3C6 531 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 XKR3Q5GH77 459 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 HABP4Q5JVS0 413 aaKnown RBP13.87□□□□□ -0.19
SMAD3-205ENST00000558428 TMEM240Q5SV17 173 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 PSRC1Q6PGN9 363 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-205ENST00000558428 MTHFD1LQ6UB35 978 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 C16orf59Q7L2K0 433 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 BRAPQ7Z569 592 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 RSPH3Q86UC2 560 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 C4orf32Q8N8J7 132 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 SPRYD3Q8NCJ5 442 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 DNAJB3Q8WWF6 145 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 DYDC2Q96IM9 177 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.87□□□□□ -0.199e-15■□□□□ 9.1
SMAD3-205ENST00000558428 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.87□□□□□ -0.19
SMAD3-205ENST00000558428 SEPT9Q9UHD8 586 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-205ENST00000558428 PCDHA2Q9Y5H9 948 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 LOXHD1Q8IVV2 1947 aa13.87□□□□□ -0.19
SMAD3-205ENST00000558428 DDX11L8A8MPP1 907 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 RSPH10B2B2RC85 870 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 STX6O43752 255 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 PARNO95453 639 aaKnown RBP13.86□□□□□ -0.19
SMAD3-205ENST00000558428 FGBP02675 491 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 PFKMP08237 780 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 RSPH10BP0C881 870 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 TECP42680 631 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 CYP4A11Q02928 519 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 CTTNQ14247 550 aaKnown RBP13.86□□□□□ -0.19
SMAD3-205ENST00000558428 TRAF7Q6Q0C0 670 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 ZNF365Q70YC5 407 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 RPAINQ86UA6 219 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 RNPC3Q96LT9 517 aaKnown RBP13.86□□□□□ -0.19
SMAD3-205ENST00000558428 EIF2AK1Q9BQI3 630 aaKnown RBP13.86□□□□□ -0.19
SMAD3-205ENST00000558428 LXNQ9BS40 222 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 FTOQ9C0B1 505 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMAD3-205ENST00000558428 FAM49AQ9H0Q0 323 aaPredicted RBP13.86□□□□□ -0.19
SMAD3-205ENST00000558428 RGL1Q9NZL6 768 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
SMAD3-205ENST00000558428 SMIM35A0A1B0GVV1 85 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 TMEM150BA6NC51 233 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 LAD1O00515 517 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 NBNO60934 754 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 STBD1O95210 358 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 C22orf31O95567 290 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 RPLP2P05387 115 aaKnown RBP13.85□□□□□ -0.19
SMAD3-205ENST00000558428 MTERF2Q49AM1 385 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 TPH2Q8IWU9 490 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 C4orf19Q8IY42 314 aa13.85□□□□□ -0.19
SMAD3-205ENST00000558428 NEK9Q8TD19 979 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms