RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PCDHA4Q9UN74 947 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 SIP14410 1827 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 MICAL3Q7RTP6 2002 aa13.52□□□□□ -0.25
HERC1-202ENST00000558324 CHMP2AO43633 222 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 CENPBP07199 599 aaPredicted RBP13.51□□□□□ -0.25
HERC1-202ENST00000558324 CIITAP33076 1130 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 SLC26A2P50443 739 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 SCRN1Q12765 414 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
HERC1-202ENST00000558324 TBCKQ8TEA7 893 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 ATP8B4Q8TF62 1192 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 GJA10Q969M2 543 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 LENG9Q96B70 501 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 TGS1Q96RS0 853 aaKnown RBP13.51□□□□□ -0.25
HERC1-202ENST00000558324 C17orf80Q9BSJ5 609 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 SLKQ9H2G2 1235 aaPredicted RBP13.51□□□□□ -0.25
HERC1-202ENST00000558324 TPCN1Q9ULQ1 816 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 GINS2Q9Y248 185 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 SAMM50Q9Y512 469 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 PCDHA2Q9Y5H9 948 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 TRPV2Q9Y5S1 764 aa13.51□□□□□ -0.25
HERC1-202ENST00000558324 HBP1O60381 514 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 LPXNO60711 386 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 TDP2O95551 362 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 ATP4AP20648 1035 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 KLRC1P26715 233 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 CD52P31358 61 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 ERVK-21P61565 698 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 HTRA4P83105 476 aaPredicted RBP13.5□□□□□ -0.25
HERC1-202ENST00000558324 KRT76Q01546 638 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 TJAP1Q5JTD0 557 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 IER5Q5VY09 327 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 MTHFD1LQ6UB35 978 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 TSHZ1Q6ZSZ6 1077 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 SMAP1Q8IYB5 467 aaPredicted RBP13.5□□□□□ -0.25
HERC1-202ENST00000558324 BLIDQ8IZY5 108 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 TOP1MTQ969P6 601 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
HERC1-202ENST00000558324 AGO3Q9H9G7 860 aaKnown RBP13.5□□□□□ -0.25
HERC1-202ENST00000558324 SUGCTQ9HAC7 445 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 GABBR1Q9UBS5 961 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 KCNJ14Q9UNX9 436 aa13.5□□□□□ -0.25
HERC1-202ENST00000558324 SMIM35A0A1B0GVV1 85 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 MSH4O15457 936 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 EDIL3O43854 480 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 GAS7O60861 476 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 CDKL5O76039 1030 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 RPLP2P05387 115 aaKnown RBP13.49□□□□□ -0.25
HERC1-202ENST00000558324 PSAPP07602 524 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 IBSPP21815 317 aaPredicted RBP13.49□□□□□ -0.25
HERC1-202ENST00000558324 AK2P54819 239 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 LRCH2Q5VUJ6 765 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 FBXO22Q8NEZ5 403 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
HERC1-202ENST00000558324 GJB4Q9NTQ9 266 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 PCDHA10Q9Y5I2 948 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 A0A0C4DFX4 3053 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 KAT6AQ92794 2004 aa13.49□□□□□ -0.25
HERC1-202ENST00000558324 COL1A2P08123 1366 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 WDR64B1ANS9 1081 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 PFKFB2O60825 505 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 POU3F3P20264 500 aaPredicted RBP13.48□□□□□ -0.25
HERC1-202ENST00000558324 USP11P51784 963 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 ANAPC15P60006 121 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 TFF2Q03403 129 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 PAK2Q13177 524 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 NPY5RQ15761 445 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 INF2Q27J81 1249 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 TMEM266Q2M3C6 531 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 ZNF484Q5JVG2 852 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 METTL13Q8N6R0 699 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 DAGLBQ8NCG7 672 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 IL27Q8NEV9 243 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 ATXN2LQ8WWM7 1075 aaKnown RBP13.48□□□□□ -0.25
HERC1-202ENST00000558324 LINC01599Q8WXQ3 324 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
HERC1-202ENST00000558324 ASB2Q96Q27 587 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 TEKT3Q9BXF9 490 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 CELF4Q9BZC1 486 aaKnown RBP13.48□□□□□ -0.25
HERC1-202ENST00000558324 C22orf23Q9BZE7 217 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 UNC45AQ9H3U1 944 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 DISC1Q9NRI5 854 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 MAFBQ9Y5Q3 323 aaPredicted RBP13.48□□□□□ -0.25
HERC1-202ENST00000558324 VCANP13611 3396 aa13.48□□□□□ -0.25
HERC1-202ENST00000558324 STK36Q9NRP7 1315 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 IGSF9BQ9UPX0 1349 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 ZBTB42B2RXF5 422 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 M0R2N6 131 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 ENPP3O14638 875 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 LARGE1O95461 756 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 C22orf31O95567 290 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 MRPS5P82675 430 aaKnown RBP13.47□□□□□ -0.25
HERC1-202ENST00000558324 NONOQ15233 471 aaKnown RBP eCLIP13.47□□□□□ -0.25
HERC1-202ENST00000558324 ANKRD1Q15327 319 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 UGCGQ16739 394 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 EPC2Q52LR7 807 aa13.47□□□□□ -0.25
HERC1-202ENST00000558324 SYMPKQ92797 1274 aaKnown RBP13.47□□□□□ -0.25
HERC1-202ENST00000558324 SLC5A5Q92911 643 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms