RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 SKIV2LQ15477 1246 aaKnown RBP14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 GALNT17Q6IS24 598 aa14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 MTHFD1LQ6UB35 978 aa14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 CCDC60Q8IWA6 550 aaPredicted RBP14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 ATP8B4Q8TF62 1192 aa14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 AIFM3Q96NN9 605 aa14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 TGS1Q96RS0 853 aaKnown RBP14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 YME1L1Q96TA2 773 aa14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 TPCN1Q9ULQ1 816 aa14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 PCDHA10Q9Y5I2 948 aa14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 GBF1Q92538 1859 aa14.01□□□□□ -0.17
CDC42BPB-202ENST00000558321 EPOPA6NHQ4 379 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 PFKFB2O60825 505 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 GAS7O60861 476 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 AK2P54819 239 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 ZNF484Q5JVG2 852 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 FBXO47Q5MNV8 452 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 TSHZ1Q6ZSZ6 1077 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 SPRED2Q7Z698 418 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 FAM177A1Q8N128 213 aaPredicted RBP14□□□□□ -0.17
CDC42BPB-202ENST00000558321 NME8Q8N427 588 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 TOP1MTQ969P6 601 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 PRDM6Q9NQX0 595 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 GABBR1Q9UBS5 961 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 KCNJ14Q9UNX9 436 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 TRPV2Q9Y5S1 764 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 MTCH2Q9Y6C9 303 aa14□□□□□ -0.17
CDC42BPB-202ENST00000558321 SMIM35A0A1B0GVV1 85 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 LINC01553A4QN01 128 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 WDR64B1ANS9 1081 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 MSH4O15457 936 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 CHMP2AO43633 222 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 DTNBO60941 627 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 ERVK-21P61565 698 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 GRB10Q13322 594 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 MKRN4PQ13434 485 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 NONOQ15233 471 aaKnown RBP eCLIP13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 LRCH2Q5VUJ6 765 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 DAGLBQ8NCG7 672 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 WASF1Q92558 559 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 RIT2Q99578 217 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 TEKT3Q9BXF9 490 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 COL25A1Q9BXS0 654 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 CELF4Q9BZC1 486 aaKnown RBP13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 ORC3Q9UBD5 711 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 GINS2Q9Y248 185 aa13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 MAFBQ9Y5Q3 323 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-202ENST00000558321 KAT6AQ92794 2004 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 COL1A2P08123 1366 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 CHD9Q3L8U1 2897 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 CCDC194A0A1B0GVG4 234 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 ENPP3O14638 875 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 EDIL3O43854 480 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 POU3F3P20264 500 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 ATP4AP20648 1035 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 CD52P31358 61 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 NEK4P51957 841 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 HTRA4P83105 476 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 KRT40Q6A162 431 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 KRT25Q7Z3Z0 450 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 METTL13Q8N6R0 699 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 NECAB1Q8N987 351 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 GDPD5Q8WTR4 605 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 BBXQ8WY36 941 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 LENG9Q96B70 501 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 IL17RAQ96F46 866 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 AGO3Q9H9G7 860 aaKnown RBP13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 DISC1Q9NRI5 854 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 NRBP2Q9NSY0 501 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 THEGQ9P2T0 379 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 MYO9BQ13459 2157 aa13.98□□□□□ -0.17
CDC42BPB-202ENST00000558321 STK36Q9NRP7 1315 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 CYP3A7-CYP3A51PA0A087WV96 503 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 M0R2N6 131 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 TDP2O95551 362 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 CYP3A7P24462 503 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 SFNP31947 248 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 JAK3P52333 1124 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 NFX1Q12986 1120 aaKnown RBP13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 PAK2Q13177 524 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 INF2Q27J81 1249 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 LETM2Q2VYF4 491 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 Q4G0T1 1027 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 KIAA0319LQ8IZA0 1049 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 IL27Q8NEV9 243 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 FBXO22Q8NEZ5 403 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 ATXN2LQ8WWM7 1075 aaKnown RBP13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 SLC5A5Q92911 643 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 GJA10Q969M2 543 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 FAM167AQ96KS9 214 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 C17orf80Q9BSJ5 609 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 PHF20Q9BVI0 1012 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 UNC45AQ9H3U1 944 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 SUGCTQ9HAC7 445 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 DDX25Q9UHL0 483 aaKnown RBP13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 PADI3Q9ULW8 664 aa13.97□□□□□ -0.17
CDC42BPB-202ENST00000558321 CEP131Q9UPN4 1083 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms