RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 GUCY2CP25092 1073 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 CDC25BP30305 580 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 KIF5BP33176 963 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 PTGIRP43119 386 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 ST5P78524 1137 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 SARM1Q6SZW1 724 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 CYB5R4Q7L1T6 521 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 CHST3Q7LGC8 479 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 ZNF804AQ7Z570 1209 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 SPATS2Q86XZ4 545 aaKnown RBP8.13□□□□□ -1.11
MARK3-212ENST00000558223 CCNJLQ8IV13 435 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 CEP57L1Q8IYX8 460 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 ANKRD42Q8N9B4 389 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 FSIP1Q8NA03 581 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 FANCBQ8NB91 859 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 ZSCAN1Q8NBB4 408 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 FLAD1Q8NFF5 587 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 ENGASEQ8NFI3 743 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 TBC1D22AQ8WUA7 517 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 KISS1RQ969F8 398 aaPredicted RBP8.13□□□□□ -1.11
MARK3-212ENST00000558223 RBM17Q96I25 401 aaKnown RBP8.13□□□□□ -1.11
MARK3-212ENST00000558223 CHAMP1Q96JM3 812 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 TM9SF2Q99805 663 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 RIOK1Q9BRS2 568 aaKnown RBP8.13□□□□□ -1.11
MARK3-212ENST00000558223 EHMT1Q9H9B1 1298 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 NRBP1Q9UHY1 535 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 SALL4Q9UJQ4 1053 aa8.13□□□□□ -1.11
MARK3-212ENST00000558223 COL5A3P25940 1745 aaPredicted RBP8.12□□□□□ -1.11
MARK3-212ENST00000558223 MYH7P12883 1935 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 RASSF10A6NK89 507 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 UPK3BL1B0FP48 263 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 UPK3BL2E5RIL1 263 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 SUSD5O60279 629 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 PAGE1O75459 146 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 TPM2P07951 284 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 DGKGP49619 791 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 STAT4Q14765 748 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 NTRK3Q16288 839 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 SLC10A6Q3KNW5 377 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 ALFQ53S48 1182 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 FAM83BQ5T0W9 1011 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 C6orf118Q5T5N4 469 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 KRT40Q6A162 431 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 ERAP2Q6P179 960 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 CCDC174Q6PII3 467 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 LHFPL2Q6ZUX7 228 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 NPAS3Q8IXF0 933 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 LCORLQ8N3X6 602 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 CRACR2BQ8N4Y2 399 aaPredicted RBP8.12□□□□□ -1.11
MARK3-212ENST00000558223 CNBD1Q8NA66 436 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 PJA1Q8NG27 643 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 IRF7Q92985 503 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 NSUN4Q96CB9 384 aaKnown RBP8.12□□□□□ -1.11
MARK3-212ENST00000558223 EXOC2Q96KP1 924 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 NAP1L5Q96NT1 182 aaPredicted RBP8.12□□□□□ -1.11
MARK3-212ENST00000558223 LZTS2Q9BRK4 669 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 SARGQ9BW04 601 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 AS3MTQ9HBK9 375 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 EPB41L4AQ9HCS5 686 aaPredicted RBP8.12□□□□□ -1.11
MARK3-212ENST00000558223 TOMM22Q9NS69 142 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 TRHDEQ9UKU6 1024 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 PCDHA7Q9UN72 937 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 PPP2R3BQ9Y5P8 575 aa8.12□□□□□ -1.11
MARK3-212ENST00000558223 H3BM21 787 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 EGFRP00533 1210 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 HTR3AP46098 478 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 GYG1P46976 350 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
MARK3-212ENST00000558223 IFIT1BQ5T764 474 aaKnown RBP8.11□□□□□ -1.11
MARK3-212ENST00000558223 FOXB2Q5VYV0 432 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 GALNT17Q6IS24 598 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 FAM173BQ6P4H8 233 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 MICU3Q86XE3 530 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 DZIP1Q86YF9 867 aaKnown RBP8.11□□□□□ -1.11
MARK3-212ENST00000558223 NOSTRINQ8IVI9 506 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 FMR1NBQ8N0W7 255 aaPredicted RBP8.11□□□□□ -1.11
MARK3-212ENST00000558223 CTCFLQ8NI51 663 aaPredicted RBP8.11□□□□□ -1.11
MARK3-212ENST00000558223 ANKS1AQ92625 1134 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 RPGRQ92834 1020 aaKnown RBP8.11□□□□□ -1.11
MARK3-212ENST00000558223 CELF1Q92879 486 aaKnown RBP8.11□□□□□ -1.11
MARK3-212ENST00000558223 KLRG1Q96E93 195 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 CRAMP1Q96RY5 1269 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 MRPL4Q9BYD3 311 aaKnown RBP8.11□□□□□ -1.11
MARK3-212ENST00000558223 RHOBTB2Q9BYZ6 727 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 IP6K2Q9UHH9 426 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 TIAM2Q8IVF5 1701 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 SCN7AQ01118 1682 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 NHSQ6T4R5 1651 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 THSD7AQ9UPZ6 1657 aa8.11□□□□□ -1.11
MARK3-212ENST00000558223 DOCK2Q92608 1830 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 NEDD4P46934 1319 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 DDX60Q8IY21 1712 aaKnown RBP8.1□□□□□ -1.11
MARK3-212ENST00000558223 FAM181BA6NEQ2 426 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 SLC26A4O43511 780 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 ABLIM3O94929 683 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 NPTXRO95502 500 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 MMP1P03956 469 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 TUBB4AP04350 444 aa8.1□□□□□ -1.11
MARK3-212ENST00000558223 CALML3P27482 149 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms