RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 ZNF200P98182 395 aaPredicted RBP11.52□□□□□ -0.57
USP3-207ENST00000558218 HIC1Q14526 733 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 UTP14CQ5TAP6 766 aaKnown RBP11.52□□□□□ -0.57
USP3-207ENST00000558218 CPLX2Q6PUV4 134 aaKnown RBP11.52□□□□□ -0.57
USP3-207ENST00000558218 HERC6Q8IVU3 1022 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 TRIM22Q8IYM9 498 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 REXO1Q8N1G1 1221 aaKnown RBP11.52□□□□□ -0.57
USP3-207ENST00000558218 MAFAQ8NHW3 353 aaPredicted RBP11.52□□□□□ -0.57
USP3-207ENST00000558218 GLG1Q92896 1179 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 C22orf23Q9BZE7 217 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 AZI2Q9H6S1 392 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 SETD4Q9NVD3 440 aa11.52□□□□□ -0.57
USP3-207ENST00000558218 YBX2Q9Y2T7 364 aaKnown RBP11.52□□□□□ -0.57
USP3-207ENST00000558218 MBLAC1A4D2B0 266 aaPredicted RBP11.51□□□□□ -0.57
USP3-207ENST00000558218 CENPBP07199 599 aaPredicted RBP11.51□□□□□ -0.57
USP3-207ENST00000558218 POU3F3P20264 500 aaPredicted RBP11.51□□□□□ -0.57
USP3-207ENST00000558218 CIITAP33076 1130 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 USP11P51784 963 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 PTPN5P54829 565 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 TOB2Q14106 344 aaPredicted RBP11.51□□□□□ -0.57
USP3-207ENST00000558218 PLEKHG4Q58EX7 1191 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 GALNT17Q6IS24 598 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 RSPH3Q86UC2 560 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 CYP2W1Q8TAV3 490 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 APBB2Q92870 758 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 NKX2-4Q9H2Z4 354 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 AGO4Q9HCK5 861 aaKnown RBP11.51□□□□□ -0.57
USP3-207ENST00000558218 TBC1D22BQ9NU19 505 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 DOCK5Q9H7D0 1870 aa11.51□□□□□ -0.57
USP3-207ENST00000558218 IGKV6D-21A0A0A0MT36 114 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 SMAPO00193 183 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 ARP10275 920 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 STAT5BP51692 787 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 RABGGTBP53611 331 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 ACTR2P61160 394 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 WDR5P61964 334 aaKnown RBP11.5□□□□□ -0.57
USP3-207ENST00000558218 SETQ01105 290 aaPredicted RBP11.5□□□□□ -0.57
USP3-207ENST00000558218 SP4Q02446 784 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 SSRP1Q08945 709 aaKnown RBP11.5□□□□□ -0.57
USP3-207ENST00000558218 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 MBTPS1Q14703 1052 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 JAKMIP3Q5VZ66 844 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP3-207ENST00000558218 DBF4BQ8NFT6 615 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 LMBR1Q8WVP7 490 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 SEPT8Q92599 483 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 WNT8BQ93098 351 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 IL17RAQ96F46 866 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 RAD9AQ99638 391 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 SLC26A6Q9BXS9 759 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 PDRG1Q9NUG6 133 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 TMEM260Q9NX78 707 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 SQORQ9Y6N5 450 aa11.5□□□□□ -0.57
USP3-207ENST00000558218 IGLV3-22A0A075B6J6 115 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 IPO5O00410 1097 aaKnown RBP11.49□□□□□ -0.57
USP3-207ENST00000558218 CPLX1O14810 134 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 TLL1O43897 1013 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 GJB5O95377 273 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 DEXIO95424 95 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 AMHP03971 560 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 ANKRD1Q15327 319 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 GRIK4Q16099 956 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 PLA2G4DQ86XP0 818 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 TRIM50Q86XT4 487 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 NME8Q8N427 588 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 USP38Q8NB14 1042 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 PHKBQ93100 1093 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 PCYT2Q99447 389 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 PRDM12Q9H4Q4 367 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 TELO2Q9Y4R8 837 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 GBF1Q92538 1859 aa11.49□□□□□ -0.57
USP3-207ENST00000558218 LAMA2P24043 3122 aaKnown RBP11.48□□□□□ -0.57
USP3-207ENST00000558218 C3orf80F5H4A9 247 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 DHX15O43143 795 aaKnown RBP11.48□□□□□ -0.57
USP3-207ENST00000558218 HBP1O60381 514 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 CDKL5O76039 1030 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 CA3P07451 260 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 INSRRP14616 1297 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 MYOGP15173 224 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 CCT2P78371 535 aaKnown RBP11.48□□□□□ -0.57
USP3-207ENST00000558218 ITGB3BPQ13352 177 aaPredicted RBP11.48□□□□□ -0.57
USP3-207ENST00000558218 MARCH8Q5T0T0 291 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 IER5Q5VY09 327 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 FAM160B1Q5W0V3 765 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 ZNF746Q6NUN9 644 aaPredicted RBP11.48□□□□□ -0.57
USP3-207ENST00000558218 MIS18BP1Q6P0N0 1132 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 ABHD15Q6UXT9 468 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 SMAP1Q8IYB5 467 aaPredicted RBP11.48□□□□□ -0.57
USP3-207ENST00000558218 PGBD1Q96JS3 809 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 ZNF577Q9BSK1 485 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 LMCD1Q9NZU5 365 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 PKD2L1Q9P0L9 805 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 TUBE1Q9UJT0 475 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 INSL6Q9Y581 213 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 PCDHA2Q9Y5H9 948 aa11.48□□□□□ -0.57
USP3-207ENST00000558218 CUL9Q8IWT3 2517 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms