RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 TMEM260Q9NX78 707 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 TRPV2Q9Y5S1 764 aa15.48■□□□□ 0.07
SNRPA1-204ENST00000558020 SMIM35A0A1B0GVV1 85 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 IPO5O00410 1097 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 PRPF3O43395 683 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 CYP3A4P08684 503 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 STAG3L1P0CL83 205 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 KCNA5P22460 613 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 HSPA4P34932 840 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 CTNNB1P35222 781 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 BMPR1AP36894 532 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 KRT76Q01546 638 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 APOBRQ0VD83 1088 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 ITGB3BPQ13352 177 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 BTG3Q14201 252 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 LEXMQ3ZCV2 418 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 PDXDC2PQ6P474 469 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 SKAP1Q86WV1 359 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 CKAP2LQ8IYA6 745 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 FBXL16Q8N461 479 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 BRF1Q92994 677 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 CELF4Q9BZC1 486 aaKnown RBP15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 LMAN2LQ9H0V9 348 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 FAM50BQ9Y247 325 aa15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 COL4A4P53420 1690 aaPredicted RBP15.47■□□□□ 0.07
SNRPA1-204ENST00000558020 IGKV6D-21A0A0A0MT36 114 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 C5orf67F2Z3F1 127 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 COL9A1P20849 921 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 KLRC1P26715 233 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 CD52P31358 61 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 SETQ01105 290 aaPredicted RBP15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 PAK2Q13177 524 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 ZNF484Q5JVG2 852 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 MTHFD1LQ6UB35 978 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 ABHD15Q6UXT9 468 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 ATP8B4Q8TF62 1192 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 ZNF577Q9BSK1 485 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 PLVAPQ9BX97 442 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 NSUN3Q9H649 340 aaKnown RBP15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 ZNF302Q9NR11 478 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 PADI3Q9ULW8 664 aa15.46■□□□□ 0.07
SNRPA1-204ENST00000558020 ADGRA3Q8IWK6 1321 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 IGSF9BQ9UPX0 1349 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 COL4A6Q14031 1691 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 FAM86B1E9PN63 330 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 DDX39AO00148 427 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 DGKIO75912 1065 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 FAM86B2P0C5J1 330 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 RPS6KB1P23443 525 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 TMEM62Q0P6H9 643 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 ZNF746Q6NUN9 644 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 SWSAP1Q6NVH7 229 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 NPAS4Q8IUM7 802 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 SMAP1Q8IYB5 467 aaPredicted RBP15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 CCDC148Q8NFR7 591 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 TRAPPC12Q8WVT3 735 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 CLP1Q92989 425 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 AGO3Q9H9G7 860 aaKnown RBP15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 LRFN2Q9ULH4 789 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 SNX14Q9Y5W7 946 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 COL1A2P08123 1366 aa15.45■□□□□ 0.06
SNRPA1-204ENST00000558020 KDM3AQ9Y4C1 1321 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 CCNE2O96020 404 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 PSAPP07602 524 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 CPA1P15085 419 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 NAALADL2Q58DX5 795 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 PTCRAQ6ISU1 281 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 EP400NLQ6ZTU2 488 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 BBXQ8WY36 941 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 PPP2R3CQ969Q6 453 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 ZNF689Q96CS4 500 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 ZBTB10Q96DT7 871 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 PABPC5Q96DU9 382 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 RNF26Q9BY78 433 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 CEP131Q9UPN4 1083 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 PCDHA10Q9Y5I2 948 aa15.44■□□□□ 0.06
SNRPA1-204ENST00000558020 IGLV3-22A0A075B6J6 115 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 GPR182O15218 404 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 DHX15O43143 795 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 EPB41L2O43491 1005 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 NFX1Q12986 1120 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 PRR16Q569H4 304 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 TCEAL5Q5H9L2 206 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 TRIM22Q8IYM9 498 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 CMTR2Q8IYT2 770 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 ZNF710Q8N1W2 664 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 CRYGNQ8WXF5 182 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 SH3GLB2Q9NR46 395 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 GINS2Q9Y248 185 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 SAMM50Q9Y512 469 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 PCDHB7Q9Y5E2 793 aa15.43■□□□□ 0.06
SNRPA1-204ENST00000558020 DENND3A2RUS2 1198 aa15.42■□□□□ 0.06
SNRPA1-204ENST00000558020 GRXCR2A6NFK2 248 aa15.42■□□□□ 0.06
SNRPA1-204ENST00000558020 MAGEB2O15479 319 aa15.42■□□□□ 0.06
SNRPA1-204ENST00000558020 RPS6KA5O75582 802 aa15.42■□□□□ 0.06
SNRPA1-204ENST00000558020 IFNAR1P17181 557 aa15.42■□□□□ 0.06
SNRPA1-204ENST00000558020 USP11P51784 963 aa15.42■□□□□ 0.06
SNRPA1-204ENST00000558020 PKN1Q16512 942 aa15.42■□□□□ 0.06
SNRPA1-204ENST00000558020 RTN4RL1Q86UN2 441 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-204ENST00000558020 CCDC60Q8IWA6 550 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms