RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 FTOQ9C0B1 505 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHD8-214ENST00000557727 SLC9A2Q9UBY0 812 aa10.2□□□□□ -0.78
CHD8-214ENST00000557727 TANC1Q9C0D5 1861 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 ELP1O95163 1332 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 EMSYQ7Z589 1322 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 EML1O00423 815 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 NEMFO60524 1076 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 PPFIA4O75335 1185 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 BRD1O95696 1058 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 LGALS2P05162 132 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 ZNF286BP0CG31 522 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 ZSCAN22P10073 491 aaPredicted RBP10.19□□□□□ -0.78
CHD8-214ENST00000557727 ATP4AP20648 1035 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 HOXC8P31273 242 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 MCM7P33993 719 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 CPT1AP50416 773 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 CDK7P50613 346 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 PSMC6P62333 389 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 PPP2R5CQ13362 524 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 ORC2Q13416 577 aaPredicted RBP10.19□□□□□ -0.78
CHD8-214ENST00000557727 BECN1Q14457 450 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 HIC1Q14526 733 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 IL17AQ16552 155 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 RILPL1Q5EBL4 403 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 C1orf53Q5VUE5 145 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 LRCH2Q5VUJ6 765 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 ZNF746Q6NUN9 644 aaPredicted RBP10.19□□□□□ -0.78
CHD8-214ENST00000557727 PCSK9Q8NBP7 692 aaKnown RBP10.19□□□□□ -0.78
CHD8-214ENST00000557727 FERMT2Q96AC1 680 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 FAM20AQ96MK3 541 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 NAP1L4Q99733 375 aaKnown RBP10.19□□□□□ -0.78
CHD8-214ENST00000557727 UNC45AQ9H3U1 944 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 C11orf49Q9H6J7 331 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 MLXIPQ9HAP2 919 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 TBC1D22BQ9NU19 505 aa10.19□□□□□ -0.78
CHD8-214ENST00000557727 RBM19Q9Y4C8 960 aaKnown RBP10.19□□□□□ -0.78
CHD8-214ENST00000557727 SCN5AQ14524 2016 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 IGSF9BQ9UPX0 1349 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 KBTBD13C9JR72 458 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 DDX39AO00148 427 aaKnown RBP10.18□□□□□ -0.78
CHD8-214ENST00000557727 STBD1O95210 358 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 F13A1P00488 732 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 SUPT20HL2P0C7V6 817 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 ATP2B1P20020 1258 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 TCF7P36402 384 aaPredicted RBP10.18□□□□□ -0.78
CHD8-214ENST00000557727 ATP2C1P98194 919 aaPredicted RBP10.18□□□□□ -0.78
CHD8-214ENST00000557727 SP4Q02446 784 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 PTPAQ15257 358 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 UGCGQ16739 394 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 DGKDQ16760 1214 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 LRRC26Q2I0M4 334 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 CCDC60Q8IWA6 550 aaPredicted RBP10.18□□□□□ -0.78
CHD8-214ENST00000557727 PPP1R13LQ8WUF5 828 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 SEPT1Q8WYJ6 367 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 SDF4Q9BRK5 362 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 SPC25Q9HBM1 224 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 POLR3EQ9NVU0 708 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 TET1Q8NFU7 2136 aa10.18□□□□□ -0.78
CHD8-214ENST00000557727 ZNF862O60290 1169 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 KPNA6O60684 536 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 GAS7O60861 476 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 OATP04181 439 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 HSP90AA1P07900 732 aaKnown RBP10.17□□□□□ -0.78
CHD8-214ENST00000557727 MYL3P08590 195 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 CFHP08603 1231 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 KRT76Q01546 638 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 GNL2Q13823 731 aaKnown RBP10.17□□□□□ -0.78
CHD8-214ENST00000557727 CALCRLQ16602 461 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 SLC39A5Q6ZMH5 540 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 TRIM67Q6ZTA4 783 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 NECAB2Q7Z6G3 386 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 AFAP1L1Q8TED9 768 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 CHAMP1Q96JM3 812 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 MTG1Q9BT17 334 aaPredicted RBP10.17□□□□□ -0.78
CHD8-214ENST00000557727 SENP6Q9GZR1 1112 aaPredicted RBP10.17□□□□□ -0.78
CHD8-214ENST00000557727 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
CHD8-214ENST00000557727 NOL7Q9UMY1 257 aaKnown RBP10.17□□□□□ -0.78
CHD8-214ENST00000557727 CLIC4Q9Y696 253 aa10.17□□□□□ -0.78
CHD8-214ENST00000557727 ZBTB42B2RXF5 422 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 H3BRB1 525 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 NOP56O00567 594 aaKnown RBP10.16□□□□□ -0.78
CHD8-214ENST00000557727 TLL1O43897 1013 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 CABYRO75952 493 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 CD4P01730 458 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 OR52Z1P0C646 297 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 PDIA4P13667 645 aaKnown RBP10.16□□□□□ -0.78
CHD8-214ENST00000557727 PRPHP41219 470 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 ADAM17P78536 824 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 GRIN1Q05586 938 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 ITGA7Q13683 1181 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 NBPF20Q3BBV1 942 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 FOXD4L5Q5VV16 416 aaPredicted RBP10.16□□□□□ -0.78
CHD8-214ENST00000557727 ANKRD33Q7Z3H0 272 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 SESTD1Q86VW0 696 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 FAM126BQ8IXS8 530 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 SMAP1Q8IYB5 467 aaPredicted RBP10.16□□□□□ -0.78
CHD8-214ENST00000557727 SLFN12Q8IYM2 578 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 IGSF22Q8N9C0 903 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 RDM1Q8NG50 284 aa10.16□□□□□ -0.78
CHD8-214ENST00000557727 FOXD4L4Q8WXT5 416 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms