RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 HMGCRP04035 888 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 NAT1P18440 290 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 CR2P20023 1033 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 COMTP21964 271 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 PTGS1P23219 599 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 GJA4P35212 333 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 JAM2P57087 298 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 R3HDM1Q15032 1099 aaKnown RBP4.44□□□□□ -1.7
GPHN-216ENST00000557678 RNF151Q2KHN1 245 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 USP39Q53GS9 565 aaKnown RBP4.44□□□□□ -1.7
GPHN-216ENST00000557678 FUKQ8N0W3 1084 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 CISD2Q8N5K1 135 aaKnown RBP4.44□□□□□ -1.7
GPHN-216ENST00000557678 ZNF669Q96BR6 464 aaPredicted RBP4.44□□□□□ -1.7
GPHN-216ENST00000557678 SCYL1Q96KG9 808 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 DPYSL5Q9BPU6 564 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 FAM184BQ9ULE4 1060 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 CBLCQ9ULV8 474 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 OAZ3Q9UMX2 235 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 TESMINQ9Y4I5 508 aa4.44□□□□□ -1.7
GPHN-216ENST00000557678 NPIPB8E9PQR5 432 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 ATP2B1P20020 1258 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 ACO1P21399 889 aaKnown RBP4.43□□□□□ -1.7
GPHN-216ENST00000557678 MC4RP32245 332 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 ACVRL1P37023 503 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 MEOX1P50221 254 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 TOP3AQ13472 1001 aaPredicted RBP4.43□□□□□ -1.7
GPHN-216ENST00000557678 FIGNQ5HY92 759 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 C16orf59Q7L2K0 433 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 RTKN2Q8IZC4 609 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 ZBTB38Q8NAP3 1195 aaPredicted RBP4.43□□□□□ -1.7
GPHN-216ENST00000557678 PCDH19Q8TAB3 1148 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 TANGO6Q9C0B7 1094 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 PDGFDQ9GZP0 370 aaPredicted RBP4.43□□□□□ -1.7
GPHN-216ENST00000557678 KIAA1683Q9H0B3 1180 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 UCKL1Q9NWZ5 548 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 NDOR1Q9UHB4 597 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 PUF60Q9UHX1 559 aaKnown RBP4.43□□□□□ -1.7
GPHN-216ENST00000557678 KDM2BQ8NHM5 1336 aa4.43□□□□□ -1.7
GPHN-216ENST00000557678 SCDO00767 359 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 ADCY3O60266 1144 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 DIAPH1O60610 1272 aaKnown RBP4.42□□□□□ -1.7
GPHN-216ENST00000557678 CRTAMO95727 393 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 AMY2AP04746 511 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 AMY2BP19961 511 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 GTF2F1P35269 517 aaKnown RBP eCLIP4.42□□□□□ -1.7
GPHN-216ENST00000557678 ETV4P43268 484 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 GABREP78334 506 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 IL13RA1P78552 427 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 KLF10Q13118 480 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 FOXE3Q13461 319 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 RASGRF1Q13972 1273 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 NAALADL2Q58DX5 795 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 AGBL4Q5VU57 503 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 FOXB2Q5VYV0 432 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 RNF207Q6ZRF8 634 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 HIPK4Q8NE63 616 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 EXTL1Q92935 676 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 GALNT8Q9NY28 637 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 FBXO10Q9UK96 956 aa4.42□□□□□ -1.7
GPHN-216ENST00000557678 E9PSI1 815 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 ARHGAP6O43182 974 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 RAD17O75943 681 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 MMEP08473 750 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 FAM153BP0C7A2 387 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 AOAHP28039 575 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 ZC3H6P61129 1189 aaKnown RBP4.41□□□□□ -1.7
GPHN-216ENST00000557678 POLNQ7Z5Q5 900 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 FILIP1Q7Z7B0 1213 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 OR14K1Q8NGZ2 314 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 ERCC4Q92889 916 aaPredicted RBP4.41□□□□□ -1.7
GPHN-216ENST00000557678 FAM89AQ96GI7 184 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 DHRS4Q9BTZ2 278 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 PLA2G12BQ9BX93 195 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 ZDHHC5Q9C0B5 715 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 CCDC113Q9H0I3 377 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 PCED1AQ9H1Q7 454 aa4.41□□□□□ -1.7
GPHN-216ENST00000557678 ING1Q9UK53 422 aaPredicted RBP4.41□□□□□ -1.7
GPHN-216ENST00000557678 PRAMEF22A3QJZ6 481 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 ZNF561-AS1K7EIQ3 104 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 ARVCFO00192 962 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 C4BPAP04003 597 aaKnown RBP4.4□□□□□ -1.71
GPHN-216ENST00000557678 C6orf222P0C671 652 aaPredicted RBP4.4□□□□□ -1.71
GPHN-216ENST00000557678 MSX2P35548 267 aaPredicted RBP4.4□□□□□ -1.71
GPHN-216ENST00000557678 ECE1P42892 770 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 CD83Q01151 205 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 HHEXQ03014 270 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 FHL2Q14192 279 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 TMEM132BQ14DG7 1078 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 LRSAM1Q6UWE0 723 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 USP30Q70CQ3 517 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 LARP4Q71RC2 724 aaKnown RBP eCLIP4.4□□□□□ -1.71
GPHN-216ENST00000557678 CXXC5Q7LFL8 322 aaKnown RBP4.4□□□□□ -1.71
GPHN-216ENST00000557678 SGMS1Q86VZ5 419 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 C1orf210Q8IVY1 113 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 EXOC2Q96KP1 924 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 PLEKHG4BQ96PX9 1271 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 MENTQ9BUN1 341 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 BTBD2Q9BX70 525 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 SIRPGQ9P1W8 387 aa4.4□□□□□ -1.71
GPHN-216ENST00000557678 COQ6Q9Y2Z9 468 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms