RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GPR27Q9NS67 375 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 TFCP2L1Q9NZI6 479 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 B4GALT6Q9UBX8 382 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 BACE2Q9Y5Z0 518 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 CLIP1P30622 1438 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 NALCNQ8IZF0 1738 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 LAMA3Q16787 3333 aa6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 PHRF1Q9P1Y6 1649 aaKnown RBP6.21□□□□□ -1.42
MTHFD1-216ENST00000557539 LTBP1Q14766 1721 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 K7ESF4 209 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 ARNTLO00327 626 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 AURKAO14965 403 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 GSNP06396 782 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 NFICP08651 508 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 U2AF1L5P0DN76 240 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 LCP1P13796 627 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 LTBRP36941 435 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 ERVK-21P61565 698 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 U2AF1Q01081 240 aaKnown RBP eCLIP6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 NFIAQ12857 509 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 NMIQ13287 307 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 KLF1Q13351 362 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 PGM2L1Q6PCE3 622 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 LBX2Q6XYB7 198 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 PNMA8AQ86V59 439 aaPredicted RBP6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 FAM20CQ8IXL6 584 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 TOP6BLQ8N6T0 577 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 DTWD2Q8NBA8 298 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 CHST14Q8NCH0 376 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 CLRN3Q8NCR9 226 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 SVIPQ8NHG7 77 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 ARPC5LQ9BPX5 153 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 SEMA6CQ9H3T2 930 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 PCMTD2Q9NV79 361 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 CLEC1BQ9P126 229 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 KCNH3Q9ULD8 1083 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 ANKRD6Q9Y2G4 727 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 NPFFR2Q9Y5X5 522 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 PLEKHH2Q8IVE3 1493 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 WASHC2AQ641Q2 1341 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 CNTNAP4Q9C0A0 1308 aa6.2□□□□□ -1.42
MTHFD1-216ENST00000557539 TROQ12816 1431 aaPredicted RBP6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 PTPDC1A2A3K4 754 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 PRR19A6NJB7 356 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 GSC2O15499 205 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 DYNC1LI2O43237 492 aaPredicted RBP6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 CBX7O95931 251 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 PLS3P13797 630 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 IFNGR1P15260 489 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 CTSKP43235 329 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 SEPHS1P49903 392 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 CDK5R2Q13319 367 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 INAVAQ3KP66 663 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 MINDY4Q4G0A6 757 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 C4orf46Q504U0 113 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 RNF43Q68DV7 783 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 APBB1IPQ7Z5R6 666 aaPredicted RBP6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 CCDC103Q8IW40 242 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 CPA6Q8N4T0 437 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 USP33Q8TEY7 942 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 FBLIM1Q8WUP2 373 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 DIO2Q92813 273 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 EVI5LQ96CN4 794 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 CLIP3Q96DZ5 547 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 CELF4Q9BZC1 486 aaKnown RBP6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 SLC13A1Q9BZW2 595 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 PRDM11Q9NQV5 511 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 C14orf119Q9NWQ9 140 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 H2AFY2Q9P0M6 372 aaPredicted RBP6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 ZBTB21Q9ULJ3 1066 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 ABT1Q9ULW3 272 aaKnown RBP6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 EYSQ5T1H1 3165 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 PASKQ96RG2 1323 aa6.19□□□□□ -1.42
MTHFD1-216ENST00000557539 MTUS2Q5JR59 1369 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 MAST4O15021 2626 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 CCDC66A2RUB6 948 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 KIAA1324LA8MWY0 1029 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 FZD9O00144 591 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 ADAMTS4O75173 837 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 EOMESO95936 686 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 NBPF7P0C2Y1 421 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 BMP3P12645 472 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 RECQLP46063 649 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 NOP2P46087 812 aaKnown RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 SESN3P58005 492 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 ST5P78524 1137 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 PURAQ00577 322 aaKnown RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 DDB1Q16531 1140 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 CLEC16AQ2KHT3 1053 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 RGL3Q3MIN7 710 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 FAM47CQ5HY64 1035 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 C10orf62Q5T681 223 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 E4F1Q66K89 784 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 OVCH1Q7RTY7 1134 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 CLEC10AQ8IUN9 316 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 KSR1Q8IVT5 923 aa6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 CISD2Q8N5K1 135 aaKnown RBP6.18□□□□□ -1.42
MTHFD1-216ENST00000557539 C1orf162Q8NEQ5 155 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms