RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 INCENPQ9NQS7 918 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 BTBD7Q9P203 1132 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 NDOR1Q9UHB4 597 aa6.54□□□□□ -1.36
VRK1-207ENST00000557352 PRAMEF25A6NGN4 478 aa6.53□□□□□ -1.36
VRK1-207ENST00000557352 EFCAB14O75071 495 aa6.53□□□□□ -1.36
VRK1-207ENST00000557352 AOAHP28039 575 aa6.53□□□□□ -1.36
VRK1-207ENST00000557352 HERVK_113P62684 666 aa6.53□□□□□ -1.36
VRK1-207ENST00000557352 SEC23AQ15436 765 aa6.53□□□□□ -1.36
VRK1-207ENST00000557352 SLC7A14Q8TBB6 771 aa6.53□□□□□ -1.36
VRK1-207ENST00000557352 LRRC37BQ96QE4 947 aa6.53□□□□□ -1.36
VRK1-207ENST00000557352 SRPK1Q96SB4 655 aaKnown RBP6.53□□□□□ -1.36
VRK1-207ENST00000557352 GALNT8Q9NY28 637 aa6.53□□□□□ -1.36
VRK1-207ENST00000557352 TCAF1Q9Y4C2 921 aa6.53□□□□□ -1.36
VRK1-207ENST00000557352 RASGRP1O95267 797 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 MC4RP32245 332 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 SELENOPP49908 381 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 IL13RA1P78552 427 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 R3HDM1Q15032 1099 aaKnown RBP6.52□□□□□ -1.37
VRK1-207ENST00000557352 WDR72Q3MJ13 1102 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 TRIM61Q5EBN2 209 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 TCTN3Q6NUS6 607 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 PALM2Q8IXS6 379 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 CISD2Q8N5K1 135 aaKnown RBP6.52□□□□□ -1.37
VRK1-207ENST00000557352 JMYQ8N9B5 988 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 NEIL1Q96FI4 390 aaPredicted RBP6.52□□□□□ -1.37
VRK1-207ENST00000557352 COQ6Q9Y2Z9 468 aa6.52□□□□□ -1.37
VRK1-207ENST00000557352 FOXS1O43638 330 aa6.51□□□□□ -1.37
VRK1-207ENST00000557352 STILQ15468 1287 aa6.51□□□□□ -1.37
VRK1-207ENST00000557352 CXXC5Q7LFL8 322 aaKnown RBP6.51□□□□□ -1.37
VRK1-207ENST00000557352 TAX1BP1Q86VP1 789 aa6.51□□□□□ -1.37
VRK1-207ENST00000557352 NOSTRINQ8IVI9 506 aa6.51□□□□□ -1.37
VRK1-207ENST00000557352 SLC16A11Q8NCK7 471 aa6.51□□□□□ -1.37
VRK1-207ENST00000557352 GIMAP8Q8ND71 665 aaPredicted RBP6.51□□□□□ -1.37
VRK1-207ENST00000557352 MKL1Q969V6 931 aa6.51□□□□□ -1.37
VRK1-207ENST00000557352 SCLYQ96I15 445 aa6.51□□□□□ -1.37
VRK1-207ENST00000557352 MAGEB10Q96LZ2 347 aaPredicted RBP6.51□□□□□ -1.37
VRK1-207ENST00000557352 CELF4Q9BZC1 486 aaKnown RBP6.51□□□□□ -1.37
VRK1-207ENST00000557352 SCDO00767 359 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 MPIG6BO95866 241 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 FSHBP01225 129 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 MMEP08473 750 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 ETV4P43268 484 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 RNF151Q2KHN1 245 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 ZNF568Q3ZCX4 644 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 TM4SF20Q53R12 229 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 FSTL4Q6MZW2 842 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 Q8N1X5 172 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 ZSWIM2Q8NEG5 633 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 WNK4Q96J92 1243 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 BTBD2Q9BX70 525 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 AMNQ9BXJ7 453 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 ZDHHC5Q9C0B5 715 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 UCKL1Q9NWZ5 548 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 SFMBT1Q9UHJ3 866 aa6.5□□□□□ -1.37
VRK1-207ENST00000557352 ZFR2Q9UPR6 939 aaKnown RBP6.5□□□□□ -1.37
VRK1-207ENST00000557352 CCDC163A0A0D9SF12 145 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 MUSKO15146 869 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 ADCY8P40145 1251 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 RRADP55042 308 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 RAC3P60763 192 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 ZMAT1Q5H9K5 638 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 SOGA3Q5TF21 947 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 OVCH1Q7RTY7 1134 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 THAP3Q8WTV1 239 aaPredicted RBP6.49□□□□□ -1.37
VRK1-207ENST00000557352 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 SEMA4AQ9H3S1 761 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 FBXO10Q9UK96 956 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 TESMINQ9Y4I5 508 aa6.49□□□□□ -1.37
VRK1-207ENST00000557352 KCNQ2O43526 872 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 APPP05067 770 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 C6P13671 934 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 KCNA6P17658 529 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 ECE1P42892 770 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 KCNQ1P51787 676 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 NOLC1Q14978 699 aaKnown RBP eCLIP6.48□□□□□ -1.37
VRK1-207ENST00000557352 SPDYAQ5MJ70 313 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 LRSAM1Q6UWE0 723 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 LARP4Q71RC2 724 aaKnown RBP eCLIP6.48□□□□□ -1.37
VRK1-207ENST00000557352 BRAPQ7Z569 592 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 FGD2Q7Z6J4 655 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 PMFBP1Q8TBY8 1022 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 ASB15Q8WXK1 588 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 MRPL4Q9BYD3 311 aaKnown RBP6.48□□□□□ -1.37
VRK1-207ENST00000557352 SCAND2PQ9GZW5 306 aaPredicted RBP6.48□□□□□ -1.37
VRK1-207ENST00000557352 KCNH7Q9NS40 1196 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 OAZ3Q9UMX2 235 aa6.48□□□□□ -1.37
VRK1-207ENST00000557352 TCRBV16S1A1N1A0A5B0 115 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 HMGCRP04035 888 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 CD83Q01151 205 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 EIF4HQ15056 248 aaKnown RBP6.47□□□□□ -1.37
VRK1-207ENST00000557352 TBR1Q16650 682 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 HS1BP3Q53T59 392 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 C2orf27AQ580R0 203 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 KANK2Q63ZY3 851 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 ABHD17CQ6PCB6 329 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 FUKQ8N0W3 1084 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 DLG3Q92796 817 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 GBP4Q96PP9 640 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 CDC42EP3Q9UKI2 254 aa6.47□□□□□ -1.37
VRK1-207ENST00000557352 NR2E1Q9Y466 385 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms