RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 FAM86B2P0C5J1 330 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 CD52P31358 61 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 BMPR1AP36894 532 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 LEXMQ3ZCV2 418 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 TIGD5Q53EQ6 642 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 FAM160B1Q5W0V3 765 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 BLOC1S2Q6QNY1 142 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 MTHFD1LQ6UB35 978 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 RTN4RL1Q86UN2 441 aaPredicted RBP18.08■□□□□ 0.48
TUBB3-213ENST00000557262 FBXL16Q8N461 479 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 BANK1Q8NDB2 785 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 CCDC12Q8WUD4 166 aaPredicted RBP18.08■□□□□ 0.48
TUBB3-213ENST00000557262 CRYGNQ8WXF5 182 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 ZNF689Q96CS4 500 aaPredicted RBP18.08■□□□□ 0.48
TUBB3-213ENST00000557262 C1QTNF1Q9BXJ1 281 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 FTHL17Q9BXU8 183 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 CELF4Q9BZC1 486 aaKnown RBP18.08■□□□□ 0.48
TUBB3-213ENST00000557262 RWDD3Q9Y3V2 267 aa18.08■□□□□ 0.48
TUBB3-213ENST00000557262 COL4A6Q14031 1691 aa18.07■□□□□ 0.48
TUBB3-213ENST00000557262 C5orf67F2Z3F1 127 aa18.07■□□□□ 0.48
TUBB3-213ENST00000557262 BACH1O14867 736 aa18.07■□□□□ 0.48
TUBB3-213ENST00000557262 DGKIO75912 1065 aa18.07■□□□□ 0.48
TUBB3-213ENST00000557262 KCNA5P22460 613 aa18.07■□□□□ 0.48
TUBB3-213ENST00000557262 KLRC1P26715 233 aa18.07■□□□□ 0.48
TUBB3-213ENST00000557262 TMEM62Q0P6H9 643 aa18.07■□□□□ 0.48
TUBB3-213ENST00000557262 PKN1Q16512 942 aa18.07■□□□□ 0.48
TUBB3-213ENST00000557262 PADI3Q9ULW8 664 aa18.07■□□□□ 0.48
TUBB3-213ENST00000557262 ADGRA3Q8IWK6 1321 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 KDM3AQ9Y4C1 1321 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 IGLV3-22A0A075B6J6 115 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 IPO5O00410 1097 aaKnown RBP18.06■□□□□ 0.48
TUBB3-213ENST00000557262 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 PSMA5P28066 241 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 GNA11P29992 359 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 CTNNB1P35222 781 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 KRT76Q01546 638 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 AKAP17AQ02040 695 aaKnown RBP18.06■□□□□ 0.48
TUBB3-213ENST00000557262 BTG3Q14201 252 aaPredicted RBP18.06■□□□□ 0.48
TUBB3-213ENST00000557262 SWSAP1Q6NVH7 229 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 MIS18BP1Q6P0N0 1132 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.06■□□□□ 0.48
TUBB3-213ENST00000557262 ATP8B4Q8TF62 1192 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 CLP1Q92989 425 aaKnown RBP18.06■□□□□ 0.48
TUBB3-213ENST00000557262 C11orf84Q9BUA3 381 aaPredicted RBP18.06■□□□□ 0.48
TUBB3-213ENST00000557262 AGXT2Q9BYV1 514 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 RC3H2Q9HBD1 1191 aaKnown RBP18.06■□□□□ 0.48
TUBB3-213ENST00000557262 ZNF302Q9NR11 478 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 TBC1D22BQ9NU19 505 aa18.06■□□□□ 0.48
TUBB3-213ENST00000557262 IGSF9BQ9UPX0 1349 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 ADAMTS3O15072 1205 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 LINC00271P0C7V0 271 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 TCEAL5Q5H9L2 206 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 ZNF484Q5JVG2 852 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 PDXDC2PQ6P474 469 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 FAM43BQ6ZT52 329 aaPredicted RBP18.05■□□□□ 0.48
TUBB3-213ENST00000557262 CCDC60Q8IWA6 550 aaPredicted RBP18.05■□□□□ 0.48
TUBB3-213ENST00000557262 REXO1Q8N1G1 1221 aaKnown RBP18.05■□□□□ 0.48
TUBB3-213ENST00000557262 CRIPAKQ8N1N5 446 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 LINC01599Q8WXQ3 324 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 CCDC136Q96JN2 1154 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 ZNF577Q9BSK1 485 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 LMAN2LQ9H0V9 348 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 NSUN3Q9H649 340 aaKnown RBP18.05■□□□□ 0.48
TUBB3-213ENST00000557262 TTC3P53804 2025 aa18.05■□□□□ 0.48
TUBB3-213ENST00000557262 REC8O95072 547 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 STAG3L1P0CL83 205 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 PAK2Q13177 524 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 NTRK3Q16288 839 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 PUS10Q3MIT2 529 aaKnown RBP18.04■□□□□ 0.48
TUBB3-213ENST00000557262 NPAS4Q8IUM7 802 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 KIAA0319LQ8IZA0 1049 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 BICD2Q8TD16 824 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 NEK9Q8TD19 979 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 PHKBQ93100 1093 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 PABPC5Q96DU9 382 aaKnown RBP18.04■□□□□ 0.48
TUBB3-213ENST00000557262 UIMC1Q96RL1 719 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 PLVAPQ9BX97 442 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 RNF26Q9BY78 433 aaPredicted RBP18.04■□□□□ 0.48
TUBB3-213ENST00000557262 EPHX3Q9H6B9 360 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 COL1A2P08123 1366 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 NID2Q14112 1375 aa18.04■□□□□ 0.48
TUBB3-213ENST00000557262 GRXCR2A6NFK2 248 aa18.03■□□□□ 0.48
TUBB3-213ENST00000557262 GRM6O15303 877 aa18.03■□□□□ 0.48
TUBB3-213ENST00000557262 NCK2O43639 380 aa18.03■□□□□ 0.48
TUBB3-213ENST00000557262 ATP4AP20648 1035 aa18.03■□□□□ 0.48
TUBB3-213ENST00000557262 SETQ01105 290 aaPredicted RBP18.03■□□□□ 0.48
TUBB3-213ENST00000557262 PTCRAQ6ISU1 281 aaPredicted RBP18.03■□□□□ 0.48
TUBB3-213ENST00000557262 ZNF746Q6NUN9 644 aaPredicted RBP18.03■□□□□ 0.48
TUBB3-213ENST00000557262 FAM178BQ8IXR5 827 aa18.03■□□□□ 0.48
TUBB3-213ENST00000557262 MAFBQ9Y5Q3 323 aaPredicted RBP18.03■□□□□ 0.48
TUBB3-213ENST00000557262 PSAPP07602 524 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 IFNAR1P17181 557 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 PDIA3P30101 505 aaKnown RBP18.02■□□□□ 0.48
TUBB3-213ENST00000557262 CIITAP33076 1130 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 EVCP57679 992 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 NFX1Q12986 1120 aaKnown RBP18.02■□□□□ 0.48
TUBB3-213ENST00000557262 COL19A1Q14993 1142 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 PRR16Q569H4 304 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 ODR4Q5SWX8 454 aa18.02■□□□□ 0.48
TUBB3-213ENST00000557262 EP400NLQ6ZTU2 488 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms