RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ALKBH5Q6P6C2 394 aaKnown RBP16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 PEX26Q7Z412 305 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 DMGDHQ9UI17 866 aaKnown RBP16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 IPO5O00410 1097 aaKnown RBP16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 ZRANB2O95218 330 aaKnown RBP eCLIP16.79■□□□□ 0.281e-7■■■■■ 26.8
TMEM55B-207ENST00000557041 SERPING1P05155 500 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 BEND6Q5SZJ8 279 aaPredicted RBP16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 STXBP4Q6ZWJ1 553 aa16.79■□□□□ 0.28
TMEM55B-207ENST00000557041 STAT1P42224 750 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 ATP1A2P50993 1020 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 LRRC55Q6ZSA7 311 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 TRAPPC11Q7Z392 1133 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 SPATA4Q8NEY3 305 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 RASSF10A6NK89 507 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 LRRIQ3A6PVS8 624 aaPredicted RBP16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 RNF40O75150 1001 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 AKAP3O75969 853 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 SNHG28P0DPA3 235 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 TCP1P17987 556 aaKnown RBP16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 USP14P54578 494 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 GIT2Q14161 759 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 RRP1BQ14684 758 aaKnown RBP16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 SH2D4AQ9H788 454 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 CEP72Q9P209 647 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 ZNF70Q9UC06 446 aaPredicted RBP16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 SNX12Q9UMY4 172 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 TNFAIP3P21580 790 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 HNRNPH2P55795 449 aaKnown RBP16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 ZSCAN26Q16670 478 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 TMEM132AQ24JP5 1023 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 XKR9Q5GH70 373 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 ZNF746Q6NUN9 644 aaPredicted RBP16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 P2RX7Q99572 595 aaKnown RBP16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 LXNQ9BS40 222 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 TEKT3Q9BXF9 490 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 SIK3Q9Y2K2 1263 aa16.78■□□□□ 0.28
TMEM55B-207ENST00000557041 ZSCAN5CA6NGD5 496 aaPredicted RBP16.77■□□□□ 0.28
TMEM55B-207ENST00000557041 HSF2BPO75031 334 aa16.77■□□□□ 0.28
TMEM55B-207ENST00000557041 RPA1P27694 616 aa16.77■□□□□ 0.28
TMEM55B-207ENST00000557041 HPDP32754 393 aaPredicted RBP16.77■□□□□ 0.28
TMEM55B-207ENST00000557041 GJC1P36383 396 aa16.77■□□□□ 0.28
TMEM55B-207ENST00000557041 PTK2Q05397 1052 aa16.77■□□□□ 0.28
TMEM55B-207ENST00000557041 KCNMA1Q12791 1236 aa16.77■□□□□ 0.28
TMEM55B-207ENST00000557041 DLATP10515 647 aaKnown RBP16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 CETN1Q12798 172 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 TMEM119Q4V9L6 283 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 CEP55Q53EZ4 464 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 ARSHQ5FYA8 562 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 PPM1KQ8N3J5 372 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 CALCOCO1Q9P1Z2 691 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 NFU1Q9UMS0 254 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 MYH8P13535 1937 aa16.77■□□□□ 0.27
TMEM55B-207ENST00000557041 HEXIM1O94992 359 aaKnown RBP16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 UCHL3P15374 230 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 FAM20AQ96MK3 541 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 PURBQ96QR8 312 aaKnown RBP16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 SELENOOQ9BVL4 669 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 DDX60Q8IY21 1712 aaKnown RBP16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 SHTN1A0MZ66 631 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 TISP43B9A030 160 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 DPH5Q9H2P9 285 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 RBM12Q9NTZ6 932 aaKnown RBP16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 SALL4Q9UJQ4 1053 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 H2AFZP0C0S5 128 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 GGCXP38435 758 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 GCLMP48507 274 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 RASA3Q14644 834 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 H2AFVQ71UI9 128 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 FAM212AQ96EL1 285 aa16.76■□□□□ 0.27
TMEM55B-207ENST00000557041 GOLGA6CA6NDK9 693 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 GOLGA6DP0CG33 693 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 PEX3P56589 373 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 SPP2Q13103 211 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 C10orf67Q8IYJ2 551 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 CTNNBL1Q8WYA6 563 aaPredicted RBP16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 GOLGA6AQ9NYA3 693 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 CWC15Q9P013 229 aaKnown RBP16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 GOLGA6L10A6NI86 522 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 YDJCA8MPS7 323 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 NFIBO00712 420 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 PSMC2P35998 433 aaKnown RBP16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 RINT1Q6NUQ1 792 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 SIAH1Q8IUQ4 282 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 DHX37Q8IY37 1157 aaKnown RBP16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 CCDC113Q9H0I3 377 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 PLCH1Q4KWH8 1693 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 EDIL3O43854 480 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 MYBL2P10244 700 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 MEA1Q16626 185 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 GRIPAP1Q4V328 841 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 CFAP58Q5T655 872 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 SAMD7Q7Z3H4 446 aa16.75■□□□□ 0.27
TMEM55B-207ENST00000557041 UHMK1Q8TAS1 419 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms