RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CDC42BPAQ5VT25 1732 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 PTPRGP23470 1445 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 DIP2BQ9P265 1576 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 HECW2Q9P2P5 1572 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 PLEKHD1A6NEE1 506 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 ACOT7O00154 380 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 DDX3XO00571 662 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-246ENST00000557030 KCNQ2O43526 872 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 GRIN1Q05586 938 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 PAK1Q13153 545 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 KCTD1Q719H9 257 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-246ENST00000557030 ALG1Q9BT22 464 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 NDOR1Q9UHB4 597 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 CNOT11Q9UKZ1 510 aaKnown RBP6.15□□□□□ -1.42
ATXN3-246ENST00000557030 PCDHA8Q9Y5H6 950 aa6.15□□□□□ -1.42
ATXN3-246ENST00000557030 WASHC2AQ641Q2 1341 aa6.15□□□□□ -1.43
ATXN3-246ENST00000557030 CCDC7Q96M83 1385 aa6.15□□□□□ -1.43
ATXN3-246ENST00000557030 ADGRL1O94910 1474 aa6.15□□□□□ -1.43
ATXN3-246ENST00000557030 RPRD2Q5VT52 1461 aaKnown RBP6.15□□□□□ -1.43
ATXN3-246ENST00000557030 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-246ENST00000557030 MROH6A6NGR9 719 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 AMY2AP04746 511 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 AMY2BP19961 511 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 IL13P35225 146 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 EFEMP1Q12805 493 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 MCTP2Q6DN12 878 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 PKN3Q6P5Z2 889 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 FERMT3Q86UX7 667 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 ZSWIM2Q8NEG5 633 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 ZSWIM3Q96MP5 696 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 CLIC6Q96NY7 704 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 SSBP3Q9BWW4 388 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-246ENST00000557030 PRKRIP1Q9H875 184 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-246ENST00000557030 KANSL2Q9H9L4 492 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 DLL4Q9NR61 685 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 USP40Q9NVE5 1235 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 TEX14Q8IWB6 1497 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 SHANK2Q9UPX8 1470 aa6.14□□□□□ -1.43
ATXN3-246ENST00000557030 CELA3BP08861 270 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 CNR2P34972 360 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 GUCY1A3Q02108 690 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 GPR19Q15760 415 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 NBPF8Q3BBV2 869 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 CD276Q5ZPR3 534 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 TMC5Q6UXY8 1006 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 C16orf59Q7L2K0 433 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 SH3TC2Q8TF17 1288 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 WRNIP1Q96S55 665 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 SLC52A2Q9HAB3 445 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 CBLCQ9ULV8 474 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 SRPK3Q9UPE1 567 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 NUB1Q9Y5A7 615 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 PCDHA9Q9Y5H5 950 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 ARID4BQ4LE39 1312 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-246ENST00000557030 MBD5Q9P267 1494 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 ARHGEF5Q12774 1597 aa6.13□□□□□ -1.43
ATXN3-246ENST00000557030 FAM90A27PA6NNH2 459 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 MAN2B1O00754 1011 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 B4GALT3O60512 393 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 CYP7B1O75881 506 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 KLHL18O94889 574 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 CRTAMO95727 393 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 CHGBP05060 677 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 CKMP06732 381 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 SRGAP2CP0DJJ0 459 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 NAT1P18440 290 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 LACTBP83111 547 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-246ENST00000557030 NFKB2Q00653 900 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 KIAA2012Q0VF49 1180 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 UBXN11Q5T124 520 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 C9orf84Q5VXU9 1444 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 SMG6Q86US8 1419 aaKnown RBP6.12□□□□□ -1.43
ATXN3-246ENST00000557030 SLC7A14Q8TBB6 771 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 DDX1Q92499 740 aaKnown RBP6.12□□□□□ -1.43
ATXN3-246ENST00000557030 FBXW5Q969U6 566 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 ANKRD30AQ9BXX3 1397 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 KCND1Q9NSA2 647 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 SFMBT1Q9UHJ3 866 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 KIAA1107Q9UPP5 1409 aa6.12□□□□□ -1.43
ATXN3-246ENST00000557030 SAMD9LQ8IVG5 1584 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 KDM5DQ9BY66 1539 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 CCDC163A0A0D9SF12 145 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 ZNF839A8K0R7 811 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 KNG1P01042 644 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 ITGB3P05106 788 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 PYGMP11217 842 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 HNRNPMP52272 730 aaKnown RBP eCLIP6.11□□□□□ -1.43
ATXN3-246ENST00000557030 SQSTM1Q13501 440 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 TBC1D10BQ4KMP7 808 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-246ENST00000557030 VASNQ6EMK4 673 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 ARHGAP36Q6ZRI8 547 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 SCLYQ96I15 445 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 LCORQ96JN0 433 aaPredicted RBP6.11□□□□□ -1.43
ATXN3-246ENST00000557030 BDH2Q9BUT1 245 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 CD244Q9BZW8 370 aa6.11□□□□□ -1.43
ATXN3-246ENST00000557030 SMURF1Q9HCE7 757 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms